Gene Dfer_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2343 
Symbol 
ID8225915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2896492 
End bp2897229 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content57% 
IMG OID644930176 
Producthypothetical protein 
Protein accessionYP_003086727 
Protein GI255036106 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0119361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTG CATTGAAAAA AAGTGAGCTG GTTGCCAGGC TCAGAAGCGA CATCGCCGCT 
TTGCAGGGCT TCCGTGCGCC GGCGTTGGGC GTAAAACACG ACGACTTTGG CCTGGGGCCA
GTAATGAAAG CTTTCCCGCA GGGCGTATTC CCTCGCGTGG GGATGCACGA GTTTATCAGC
CAGTCAGCCG AGCAGACTGC GGCCACATCG GGCTTTATGG CCGCCCTGGC CGGTAAGATG
ATGAAACAGG ACGGGCTCTG CGTCTGGGTG GGTACACGCC GAACGGTCTA CCCTTTCGGT
CTGAGCCAAT TCGGAGTGTC ACCCGACCGG GTGATCTTCG TCGATCTGAA AAAGGATAAA
GACCTTCTGT GGGCTATCGA AGAAGCGCTC AGATGCGATG CGCTATCAGC GGTCGTAGGC
GAAATCAAGG AGCTGAACCT GACCGAGTCG CGAAGATTAC AGCTGACTGT CGAAGAAAGC
AAGGTCACAG GCCTTCTGCA TAGGGTTTCG CCCCGGCTTT CAAACCCGGT TGCCGCAGTC
TGCCGCTGGC GGATCAGCCC GCTCCCCGGT GTAGAAGACC AAGTTCTGCC TGGCATCGGC
TTTCCACGCT GGCAGGTTCA GATCGAGAAA GTACGTAACG GCGAGCCAGG CAGCTGGCCA
CTGGAATTCC GCGATGGCAA TTTCGAGCTC GTTGGTGACT CTGTTTCTTT TCACCAGTAT
ATATCCAAGG TTGGGTAG
 
Protein sequence
METALKKSEL VARLRSDIAA LQGFRAPALG VKHDDFGLGP VMKAFPQGVF PRVGMHEFIS 
QSAEQTAATS GFMAALAGKM MKQDGLCVWV GTRRTVYPFG LSQFGVSPDR VIFVDLKKDK
DLLWAIEEAL RCDALSAVVG EIKELNLTES RRLQLTVEES KVTGLLHRVS PRLSNPVAAV
CRWRISPLPG VEDQVLPGIG FPRWQVQIEK VRNGEPGSWP LEFRDGNFEL VGDSVSFHQY
ISKVG