Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2332 |
Symbol | |
ID | 8225904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2881419 |
End bp | 2882000 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644930165 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003086716 |
Protein GI | 255036095 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.950158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGAA ACCGTAATTT CGACGAGCAG GATATTCTAG ACAGGGCAAT CGAGCTATTT AAGATTCGCG GGTATCGTGG TACAACGCCT GAGGATTTGG TGAGCACCTT GGGTATAAGC AGATCCAGTC TGTACAACAC GTTTGGGGAC AAACATTCAT TGCTGCTCAA ATCACTTCAC CGGTATCACG AAAAGACGGT TGTGGGGCTG GAGAATATTA TTTCGAACAC GAGAGAACCG CTAGCGGGCA TAAAGCTTAT CTTCAAACTG TCGATTGAGG GCACATATCC CGGCGGCATG CCGCAGGGCT GCTTTTTGAT CAATTCCATT ATCGAGTTCG GCCCGGACGA GCCGGCAGCG GTTGAAATCG TCAGGAAAAG TATTGATGCT ACCAGGGGGG CATTGCTTCA TTTTGTGCTT GACGGCAAGA AAGAGGGGAA GTTTTCTGAT AGTCTCGATG CTGAGACGAT GGCAGATTAT TTACAGAACT GTATTAACGG GATCGTTGTT TCGGCCAAAG CGGGAATGAC CCAGGCCGAA TGTGAAAGAA TGGTTGAGAG CACGCTGATA CTACTGCACT AG
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Protein sequence | MARNRNFDEQ DILDRAIELF KIRGYRGTTP EDLVSTLGIS RSSLYNTFGD KHSLLLKSLH RYHEKTVVGL ENIISNTREP LAGIKLIFKL SIEGTYPGGM PQGCFLINSI IEFGPDEPAA VEIVRKSIDA TRGALLHFVL DGKKEGKFSD SLDAETMADY LQNCINGIVV SAKAGMTQAE CERMVESTLI LLH
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