Gene Dfer_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2332 
Symbol 
ID8225904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2881419 
End bp2882000 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content49% 
IMG OID644930165 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003086716 
Protein GI255036095 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.950158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAA ACCGTAATTT CGACGAGCAG GATATTCTAG ACAGGGCAAT CGAGCTATTT 
AAGATTCGCG GGTATCGTGG TACAACGCCT GAGGATTTGG TGAGCACCTT GGGTATAAGC
AGATCCAGTC TGTACAACAC GTTTGGGGAC AAACATTCAT TGCTGCTCAA ATCACTTCAC
CGGTATCACG AAAAGACGGT TGTGGGGCTG GAGAATATTA TTTCGAACAC GAGAGAACCG
CTAGCGGGCA TAAAGCTTAT CTTCAAACTG TCGATTGAGG GCACATATCC CGGCGGCATG
CCGCAGGGCT GCTTTTTGAT CAATTCCATT ATCGAGTTCG GCCCGGACGA GCCGGCAGCG
GTTGAAATCG TCAGGAAAAG TATTGATGCT ACCAGGGGGG CATTGCTTCA TTTTGTGCTT
GACGGCAAGA AAGAGGGGAA GTTTTCTGAT AGTCTCGATG CTGAGACGAT GGCAGATTAT
TTACAGAACT GTATTAACGG GATCGTTGTT TCGGCCAAAG CGGGAATGAC CCAGGCCGAA
TGTGAAAGAA TGGTTGAGAG CACGCTGATA CTACTGCACT AG
 
Protein sequence
MARNRNFDEQ DILDRAIELF KIRGYRGTTP EDLVSTLGIS RSSLYNTFGD KHSLLLKSLH 
RYHEKTVVGL ENIISNTREP LAGIKLIFKL SIEGTYPGGM PQGCFLINSI IEFGPDEPAA
VEIVRKSIDA TRGALLHFVL DGKKEGKFSD SLDAETMADY LQNCINGIVV SAKAGMTQAE
CERMVESTLI LLH