| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2267 |
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| Symbol | |
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| ID | 8225839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2789787 |
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| End bp | 2793227 |
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| Gene Length | 3441 bp |
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| Protein Length | 1146 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644930103 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086654 |
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| Protein GI | 255036033 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA GACTTAAAAT CATAAGTCCG CTGTGGACAA TTATGAAAGT TTCAGGCATC
CATCTATTCT TAATGTTTAT CGCAACCGCC TACTCCTACG CCCACACCAC GAGCGCACAG
GAGCTGTTGA CGCAGCGCGT ATCCATTCGG GTAGAGCAAA AACAGATCCG GGAAGTGCTG
AGCACCCTGG AAGCGAGTAC CCGCGTGAAG TTCGTATATA GTGTACAGTT ACTTCCCGTC
GACCGTAAAG TAACGCTCCG CATGGAGAAC AGGCCGTTGA GCGAAGTGCT GGAAACGATA
TTTTCTCCGG ATCATATCAG CTACAAGCTC ATCCGGAACA AGGTTGTGCT TAAAAAAATG
GAACGCGCAG CGGCTGACAT TCAGATTATC GAGCCTGCCA ATGCGCTGGC CTCCCTGGGG
CGTGCGATCG ACCGGACGCT GACGGGCGTG GTGAAGGATG AAACCGGGGC GGGTTTGCCG
GGCGTAAACA TCGCCATCAA GGGCACCACT TCGGGCACGT CCACGGATGT GGAGGGGCGT
TTCTCGCTTT CGATTCCCAA TGATGACGTC ACGCTGGTTT TCTCTTTCGT GGGCTACACG
GCGCAGGAAA TCCGGCCGGG CGTTCAGAGT GCATTGCAGG TAACCCTCGC AGCCGATACC
AGGGCGCTGG AAGAAGTCGT GGTAGTAGGT TATGGCACGG TGAAGCGGCA AGATTTTACG
GGATCGGTAG CCTCGATGAA GCTGGAAAAC TCCCCGATGG CCATGCTGCC CAGCATGAAT
GCATTGGAAA CATTAAAGGG AAGCCTTCCC GGCCTCGATG TGGGCGCGAG CAACACAGCC
GGCGGCCAGC CTACCGTGCA AATCCGCGGC CAGAACTCGA TCAACGGCAA CAACGACCCG
CTTATCGTGC TGGACGGCGT GATTTTCCTG GGTAGCCTGG CGGACATTAA CCCCGCCGAC
ATTGCCAGCT TCGACGTGCT GAAAGACGCT ACCTCCGCCG CCGCCTACGG TTCCCGATCG
GCCAACGGGG TGATCGCGAT CACGACCAAA AGAGGAAAAG CCGGCAAGCC GGTGATCACA
TTGAACTCGT CGACGGGCTT CCAGACGTGG CAGCGACGCC CGGAAATGAT GAAAGGCGAA
GAATGGCTCA GCGTCGTGAA TGCCCGTAAC AAATACACCG AAGGATCGAC CAACTGGCTC
AAACCGGGCG AGATCGCCAA CCGCGATGCC GGCCGCGAAA CCAACTGGCT GGACGAAACG
ACCCGCACCG GGGTAATCCA AACCTACCAG GCAGCCGTGT CGGGCGCGAG CGAGAAGGTG
AATTACTACC TCTCGACGTC GTATGACGGC AACCGGGGAA TTGTGAAAGG CGACCAGTTC
AAACGGATAT CCGTGCTGGG AAAAGTGAAA ACAGAGATCA CGAAATGGCT CGAACTCGGC
GTGGACGGCA GCTTTTCGAA AAGGGACTAC TCGGGAATTG CGGCCAACAT CGGCGAAGCG
CAAACAATGT CGCCCTACGG CGTGATGTAC CGCGACGACC AGGGGAATCT TGAAAAATAC
CCTTACACCC AATCGGCCGT AAACCCGCTT TGGGGCATCG AAGACGGCAC GCGCGACAAC
AGGGATAACC TCTACAACTA CCGCCTGAAT ACCAACGCGC TCATTACCGT GCCCTGGGTG
GAGGGCCTTA CCTACCGGGT AAACTTTCTG AACAATGTGA ACAAGAACGA AAGAGGCACA
TTCACCCACG AAAACTTCTA TGTACAGGAA GGTGAAGGAT TGGACAGGTA TTCGCCGGCA
GTGATCCAGG GCTTTCTGAC CAATGCCACC GGTAACCTGG AAAGAAGCGG CGTCACCAGC
TGGGTTCTCG ACAACATTAT CAACTATAAG AACAATTTCG GCAAACACGG CATTGACCTG
ACACTGGTAG CCACGCGCGA CAACCAAAAG GCGACCTACA TGAATGTGAC CGGCAACAAT
TACGCCGCTA ACGGAAATAC AGCGCTGGGA CTCGACGGGC TGCACAAGGC CACGGTGCAA
AGGGTGGACC TTACCGGTGT TCCCACGGGG CAGGACATGA GTGTGTTCCA ACGTTCCAAC
ATCGGTTACC TCGCACGTGT TAACTACTCC TTTGATGATA AATACTTCTT CACAGGCTCA
TTCCGCCGAG ACGGAGCGTC CGTATTCGGT GCCAACAACA AGTTTGCCAA CTTCATGGCG
GCCGGCGTGG CCTGGAAAGT GACCAGCGAA GAGTTTCTCC GCAACTTCCA GCAGCTCAAC
AACCTGAAAG TCAAATTCTC GTTTGGACAA AACGGAAGCC AGGGCGTTGA ACCTTACGGA
ACATTGTCGA CCATTGCCAA TGCGGCCGGC GGCGGCGTGC GCTACCAATG GGCCAATACC
CCCGGGGCGA TTTATTACGG CTTGTACCAA AACACGCTGG GCAATGCGGA CCTCGGCTGG
GAAAAAACCA CTTCCTGGAA CGCGGGCTTC GAATCGGCGT GGTTCAGAAA CCGCGTAATA
TTCGATGTGG ATGCCTATTT CGGCGCTACC ACCGACCAGA TCTTCACGCG CAGCATTCCC
GTAATGACCG GTTTCAAAAC GATCAAAACC TCGATGGGCC AGGTTAACAA CCGCGGGATC
GAGATTACTT TGCGGACCGT CAACTATCAG GATAAAGACC TGACCTGGGG AACGTCGTTC
ACTTTCTGGC AAAACCGGAA CAAACTCGTG AAACTCTATG GTGAGGACAA AAACGGAGAT
GGCCAGGACG ACGACGACAT CGCCAACAAC CTCTTCATCG GCCATCCGCT GGGCTCCATT
TTCGGGTACG AGCAAATCGG CATAGTGCAG GAAAACGACG CGGAATACAT TGCACTGACC
GGCGCGGCAC CGGGAGCGCC CAAATACCGC GATATCGACG GCACGCCGGG CATTTCAGCC
ACCGACCGCA AAGTGCTCGG GTACAGCAAG GAAAACTTCC GCCTGAACAT GAGCAACACC
GTGAGCTACA AAAACTTTGA CCTGTATGTG CTCGTATCGG GTATTTTCGG AGGTGGAAAC
TGGTACAAGA AAAACAACTC AGCTGCTTAC CTCACTGCCG GAACGGGCCG TTTCAATGAC
AACATGACCT CGAAGCCTTA CTGGACGCCC GAGAACCAGA GCAATGAATT TCCATCGGCA
TACTTCGCCG GCGACGGCCG CTTCCTGGGT TTACAATCGA GAACATTTGT CCGCATTCAG
GATGCGACAT TGTCATACCG CCTGAAACCG GAATGGCTTT CGAAAATCAG GATGAATTCC
GCGAAGGTGT TCGTGAGCGG CCGTAACCTC GCCACATTCA CCAAATGGTT TGGAGGAGAT
CCTGAAACAG GAACGCCGGT GCGTGAAAAC ACTTTCCCTG TTCCGTCCAC CTACTCCATT
GGCGCAAACA TTAGCTTCTA A
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| Protein sequence | MKKRLKIISP LWTIMKVSGI HLFLMFIATA YSYAHTTSAQ ELLTQRVSIR VEQKQIREVL
STLEASTRVK FVYSVQLLPV DRKVTLRMEN RPLSEVLETI FSPDHISYKL IRNKVVLKKM
ERAAADIQII EPANALASLG RAIDRTLTGV VKDETGAGLP GVNIAIKGTT SGTSTDVEGR
FSLSIPNDDV TLVFSFVGYT AQEIRPGVQS ALQVTLAADT RALEEVVVVG YGTVKRQDFT
GSVASMKLEN SPMAMLPSMN ALETLKGSLP GLDVGASNTA GGQPTVQIRG QNSINGNNDP
LIVLDGVIFL GSLADINPAD IASFDVLKDA TSAAAYGSRS ANGVIAITTK RGKAGKPVIT
LNSSTGFQTW QRRPEMMKGE EWLSVVNARN KYTEGSTNWL KPGEIANRDA GRETNWLDET
TRTGVIQTYQ AAVSGASEKV NYYLSTSYDG NRGIVKGDQF KRISVLGKVK TEITKWLELG
VDGSFSKRDY SGIAANIGEA QTMSPYGVMY RDDQGNLEKY PYTQSAVNPL WGIEDGTRDN
RDNLYNYRLN TNALITVPWV EGLTYRVNFL NNVNKNERGT FTHENFYVQE GEGLDRYSPA
VIQGFLTNAT GNLERSGVTS WVLDNIINYK NNFGKHGIDL TLVATRDNQK ATYMNVTGNN
YAANGNTALG LDGLHKATVQ RVDLTGVPTG QDMSVFQRSN IGYLARVNYS FDDKYFFTGS
FRRDGASVFG ANNKFANFMA AGVAWKVTSE EFLRNFQQLN NLKVKFSFGQ NGSQGVEPYG
TLSTIANAAG GGVRYQWANT PGAIYYGLYQ NTLGNADLGW EKTTSWNAGF ESAWFRNRVI
FDVDAYFGAT TDQIFTRSIP VMTGFKTIKT SMGQVNNRGI EITLRTVNYQ DKDLTWGTSF
TFWQNRNKLV KLYGEDKNGD GQDDDDIANN LFIGHPLGSI FGYEQIGIVQ ENDAEYIALT
GAAPGAPKYR DIDGTPGISA TDRKVLGYSK ENFRLNMSNT VSYKNFDLYV LVSGIFGGGN
WYKKNNSAAY LTAGTGRFND NMTSKPYWTP ENQSNEFPSA YFAGDGRFLG LQSRTFVRIQ
DATLSYRLKP EWLSKIRMNS AKVFVSGRNL ATFTKWFGGD PETGTPVREN TFPVPSTYSI
GANISF
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