| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2219 |
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| Symbol | |
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| ID | 8225791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2718729 |
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| End bp | 2722049 |
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| Gene Length | 3321 bp |
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| Protein Length | 1106 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644930055 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086606 |
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| Protein GI | 255035985 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.136302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TCGCCGCACA TTATGCATTC AAATGCATGA GGACCACCGT GGGCCCACTG
CTGCTGGTGC TTGGATTCAT CCACCTTTCC TGGGCGCGAA CGGCCGCCGG ACAGGAGTTG
CTCAATCGAA GTATATCCAT TACCGTTCAG GAAAAAAGTC TTAAATCGGT GCTGCATCTG
ATCGAAAAGC AGGCTGAGAT CAAATTTTCG TATAGCCCGC AGGTGGTGCC CGTGCAACAG
CGCGTGACGT TAAATGCTGA AAACCGAAGC CTGGGCGAGG TGCTGGACCT GATCCTGAAA
CCGGTGCAGG TGCGCTATGT TGTCGCGGGA AGGCAGATCA TCCTGTCGCG GGCGGAGCCG
GACCAGAAAA CGGGTGGCAT AGCGCCCGCA GCGCACCCCG CGTCGGAGCA AATGCGCCCG
CAGGAGCGCC GGGTAGAAGG CAAAGTAACC GATGAAGCGG GCGCCGGGCT GCCCGGCGTG
AGCGTCGTGG TGAAAGGGAC GCAGGCGGGA ACCGTGACGG ATGTGGACGG GAAATTTGCA
ATGGAAATGC CGGAATCGGC TGATTTGCTG GTATTTTCCT TTGTGGGCTA TCTGCCTCAG
GAGGTGGAAG TCGGTTCACG GACACAGGTG GACATCGTTT TGAAGCCCGA TACCAAAGCG
TTGGAAGAAG TGGTGGTAGT GGGTTATGGC ACTGTCAAAA AACGTGACCT CACCGGCGCC
ATCGCGAGTG TGAATGTGGA GCAGACGAAA CTTCAACCCA ATACCAATGC TTCGCAAATA
CTGCGGGGAA CCACGGCCGG CGTGCAGGTT ACCGACAATG GCCGTCCGGG CCAGGCGGGG
GAAATCCGTA TCCGCGGTAT CAACTCTATT TCCGGAAGCA CCGCCCCGCT CATCGTATTG
GATGGCATCA TCTACGCCGG TGGAAGCCTG TCGGACATTA ATCCGAGCGA TATCGAGTCG
ATCGACGTGC TCAAAGATGC CAGCTCCACT GCTATTTACG GCTCCCTGGC CGCCAATGGC
GTGATCGAAG TGACCACCAA ACGGGGGAAG TCCGGTAAGC CGGTGTTTTC ATTCAACACT
TACGTAGGCG CTTCGGATTA TGCTTTTTTA CCCAAACTCC TCAATGCGGA GCAATATCTC
GCCGCCCGCA AAGATGCGGA GATCGCCGAC GGCGGACCGG TGCCATTCCA GCCGGTGGAG
CTTGAAAACA TCGCCGCAGG AAGGTCAATC AAGCCTTTTG AGGAAATCAG ACAATCGGCT
CCGATGTCCA ATTACGAGCT AAGCGTATCC GGGAAAACCG AGCGGACGAG CTATTTCTTT
TCCGGCGGCT ATCTCAAAGC CAAGTCGCCG GTAAAAGGCG ACAATTTCAG CCGGATTTCC
AGTCGGCTTA ACCTTTCGGT AGATGCGACC GACTGGCTGA AACTGGGCGT CAACTCCGGC
TTCACTTCCC GCGACGACTC GGGCGTACGT GCGGACCTCG TCGCTACGAC CTACCTGAGC
CCATTTGCCA GCCTTTTTCT GGACGACGGC AAATCGCCCC GACCGTTACC GCAGGATATT
GGCCTTGTTG CCAACCCGTT GATCGGCCAT GCCCTGAACC AGCGGAAATC GATTACCAAC
GCATTGTTTG CCAATGGTTT CGCCGATGTA CGCATTTGGA ATGGACTTTC CTACAAGCTC
AATGCGGCGT ACACCCGTAC GGATTCGAAA GAATTTAAAT TCAACCCATC CTACGAACCG
CTGAACCGGC TCGGCTCCGG CTCCAAATAC CATGGTGAGC GGCAAAATAT CACAGTGGAG
AACATCATCA GCTACAAGCA GCAGATCACC CCGCGCCAGA GCCTGGACGT GACATTATTG
TACGGTGCCT ATGAGCAGAA AAGTGAATCC TCGATGCTTT CGAGCCAGAA CATTTTCAAT
GATGCACTGG GCTACAATGC GCTCGAAATC GGGGAGGGGT TCAACATTGA TGCGTCGGCG
CTTAAAAACC GGCAGCTTTC GAGCATGGCG CGGCTCGGAT ACTCGGTGGC GGGCAAGTAC
CTGGCCACCG TGAGCATCCG GCGCGACGGT TTTTCGGCCT TCGGGGCAGG CAAGAAATTC
GGGGTGTTTC CGGCCGTTGC ACTGAGCTGG AATGTGACCG AGGAAGCATT TATGCACGAT
TTGAAGGAAA TCAACTTTTT GAAACTGAGG GCTTCCTGGG GGCGGAACGG AAACCGCGGC
GTGAAAGAAT ACGCTTCCCT GAGCCAGGTG GAACAGAAAA ACTATGTGTT TGGCGATGGC
AGCGCCACGT CTGTCGGATT GAGCCCGAGC AGCCTCGCTA ACCCGAGTCT GGGCTGGGAA
ACTTCGGAAA GCACCAACAT CGGGGCCGAC GTGCAGGTAT TTAACAGCCG GATCAGCGCT
TCGGTGAATT ACTACTGGAC GCGGACTTAT GACCTGTTGC TCGAACAGGC CATTCCCAAC
ACCAACGGAT TTGAGAAGTT TCTGCGGAAT GTAGGCCAGA CAAGAAACCA CGGTCTGGAA
ATCGACCTGA AAAGCACCAA CATCGAACGC GGCGGATTTA CCTGGAACAC CAGCCTCGCT
TTCTCGTTCA ACCGGAATAG GGTCGTGAAA CTGACCGGCG CCGACGTGAA CAACGACGGC
CGCGAGGACG ACGACATTGC CAGCGGCTGG TTTATCGGAC ATCCGCTCAT GAGCAATTAT
AGCTACGTTT TTGATGGAAT TTTTCAGGAA GGCGACGACC TGAGCCTTAT TCCGGGAGCT
ATGCCGGGCG ATATCCGCTT CAAGGACATT AGCGGCCCCG ATGGCGTGCC CGATGGAAAA
ATCACTCCGC AGGACCGCAC TGTGATCAGC AATGCACAGC CGCGGTACAA TCTGGGCATT
ACCAACGTGT GGAGCTACAA AGGCCTGAGC CTGTCTGCCG CATTCAACAT CCGCCATGGC
GGGTACAGCA GAATGGATAT GCTGAACCCG GGCACAAACT TTTACGACCA GGCCAACTTC
CTCGACGTGC CTTACTGGAC GCCCGGCAAC CCGATCGACA CACGGCCGAG GATCAACTAC
CGAAACCCGC TCGGATACGG TTTCTACGAA AGCCGCAGCT TTGCCAGGCT GCAAGACGTT
TCATTGTCGT ACAACATACC CGATAAATTG TTAAAACCGG TGAAAATCGG CTCGCTGCAA
GTGTATGTAA GCGCCAAAAA CCTGGCAACC ATCACGAAAT GGAAAGGATG GGACCCTGAA
TTCGGCGGCG GCGGCCGGGG GCCTGGGGAG AATGGGCCTT TGCTCAAAAC CTTCATTGCC
GGGCTGAATA TTTCTTTCTA A
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| Protein sequence | MKKLAAHYAF KCMRTTVGPL LLVLGFIHLS WARTAAGQEL LNRSISITVQ EKSLKSVLHL
IEKQAEIKFS YSPQVVPVQQ RVTLNAENRS LGEVLDLILK PVQVRYVVAG RQIILSRAEP
DQKTGGIAPA AHPASEQMRP QERRVEGKVT DEAGAGLPGV SVVVKGTQAG TVTDVDGKFA
MEMPESADLL VFSFVGYLPQ EVEVGSRTQV DIVLKPDTKA LEEVVVVGYG TVKKRDLTGA
IASVNVEQTK LQPNTNASQI LRGTTAGVQV TDNGRPGQAG EIRIRGINSI SGSTAPLIVL
DGIIYAGGSL SDINPSDIES IDVLKDASST AIYGSLAANG VIEVTTKRGK SGKPVFSFNT
YVGASDYAFL PKLLNAEQYL AARKDAEIAD GGPVPFQPVE LENIAAGRSI KPFEEIRQSA
PMSNYELSVS GKTERTSYFF SGGYLKAKSP VKGDNFSRIS SRLNLSVDAT DWLKLGVNSG
FTSRDDSGVR ADLVATTYLS PFASLFLDDG KSPRPLPQDI GLVANPLIGH ALNQRKSITN
ALFANGFADV RIWNGLSYKL NAAYTRTDSK EFKFNPSYEP LNRLGSGSKY HGERQNITVE
NIISYKQQIT PRQSLDVTLL YGAYEQKSES SMLSSQNIFN DALGYNALEI GEGFNIDASA
LKNRQLSSMA RLGYSVAGKY LATVSIRRDG FSAFGAGKKF GVFPAVALSW NVTEEAFMHD
LKEINFLKLR ASWGRNGNRG VKEYASLSQV EQKNYVFGDG SATSVGLSPS SLANPSLGWE
TSESTNIGAD VQVFNSRISA SVNYYWTRTY DLLLEQAIPN TNGFEKFLRN VGQTRNHGLE
IDLKSTNIER GGFTWNTSLA FSFNRNRVVK LTGADVNNDG REDDDIASGW FIGHPLMSNY
SYVFDGIFQE GDDLSLIPGA MPGDIRFKDI SGPDGVPDGK ITPQDRTVIS NAQPRYNLGI
TNVWSYKGLS LSAAFNIRHG GYSRMDMLNP GTNFYDQANF LDVPYWTPGN PIDTRPRINY
RNPLGYGFYE SRSFARLQDV SLSYNIPDKL LKPVKIGSLQ VYVSAKNLAT ITKWKGWDPE
FGGGGRGPGE NGPLLKTFIA GLNISF
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