| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2186 |
|---|
| Symbol | |
|---|
| ID | 8225758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2672400 |
|---|
| End bp | 2673908 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644930023 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_003086574 |
|---|
| Protein GI | 255035953 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGA GAAACACGCT GCTCCTGACG GTGATCGTCC TGAAATTTCT GTTACAATAT
TTCCTCATTA TCCCTGAGTA CGAGCTGCAT CGCGATGAAT ACCTGCACCT CGATCAGGGC
AATCACCTGG CCTGGGGCTT CGTGTCGGTG CCGCCGGTGA CGTCCTGGAT TGCGTGGCTT
ATCCATGCAT TGGGCAAGGG CGAATGGGTG GTGCGGTTCT TCCCGGCGCT GTGGGGCGCG
CTCACGATCC TGGTGGTCTG GAAAACCGTG GAGCGGCTTG GGGGCGGGTT GTATGCCTGC
GGACTTGCGG CGTCGTGTAT GCTGTTTTCG GTGCTGTTGC GGCTCAATCA GCTTTTTCAG
CCCAATTCTT TCGATGTGCT ATGCTGGACG GCGCTGTATT ATTTGCTGAT AAGCTTTATC
GCATCCACCG ACCGGCGCTG GCTGTACGGG TTGGCAGCGG TTTTCGCATT GGGTTTTTTA
AATAAATACA ACATCATATT CGCAGCGGTA GGCCTGCTGC CGGCGATTTT GCTCACATCG
CAGCGACACC TTTTGCTCAA CAAACACATT TATCTGGCAT TATTGCTGGC ATTGCTGCTC
ATCGCGCCAA ACCTGATCTG GCAGTACCGG AATAATTTTC CCGTGCTTCA CCACATGCAA
GCATTGGCCG AAACGCAGCT GGTGAATGTC AACCGCATGG ATTTCCTGAA GGAACAGCTG
CTGTTTTTCG CAGGAGCGCT TCCGGTGATC GCCGCGGGGC TCTTCGCATT GTGTTCGCAC
GCGGCATTTG TGCGCTACCG GTTATTCTTT TTTACCATTG TCATCACGCT TGCAACTTTC
ACCTACCTCC GCGCGAAGGG CTATTATGCG ATCGGCATTT ACCCCGTTTA CATCGCTTTT
GGGGCCGTTT ACATTGCTGC CCAGGTGAGA GCCAGGTGGC TGCGGGGCGC GTTTGTACTG
TTGCCCGTTG TGCTGTTCAT TCCATTGTTG CAGGTTGCAT TTCCCAACAA AACACCCGAA
CGGATCGTGA CGAATCCCGA GCCTTACCGG AAGCTGGGGT TGCTGCGCTG GGAGGATGGG
AAGGATCACC AGCTTCCGCA GGATTTTGCC GATATGCTGG GCTGGCGTGA GCTGGCAGCC
AAAGTGGATG CGGCCTACGC CGCCGCACCG GACCCGGAAA GTACGATCGT GCTCTGCGAC
AATTACGGCC AGGCCGGGGC GATCAACTAT TACTCGAAAA TGGGCGTAAA GGCGGTCACT
TTCAATGCGG ATTATGTGAA CTGGTTCGAC CTGAACCAAC GGTACAAGCA CCTGATCAGG
GTTAAAACCG GCGGCGAACG AGAGGAAGAG ATGAAGGAAA CGGGTCCGCT GTTCGCAACC
GGTTACGCGG CAGATTCGGT GACGAACCGC TTTGCCCGGG AGCATGGAAC GGTGGTGTTT
GTATTCCTGG ATGCGCGGGT CGATGTGAAT GCCCGGCTGG AAAAGGAAAT TGCGGAGGAA
CGATGGTAA
|
|---|
| Protein sequence | MNQRNTLLLT VIVLKFLLQY FLIIPEYELH RDEYLHLDQG NHLAWGFVSV PPVTSWIAWL
IHALGKGEWV VRFFPALWGA LTILVVWKTV ERLGGGLYAC GLAASCMLFS VLLRLNQLFQ
PNSFDVLCWT ALYYLLISFI ASTDRRWLYG LAAVFALGFL NKYNIIFAAV GLLPAILLTS
QRHLLLNKHI YLALLLALLL IAPNLIWQYR NNFPVLHHMQ ALAETQLVNV NRMDFLKEQL
LFFAGALPVI AAGLFALCSH AAFVRYRLFF FTIVITLATF TYLRAKGYYA IGIYPVYIAF
GAVYIAAQVR ARWLRGAFVL LPVVLFIPLL QVAFPNKTPE RIVTNPEPYR KLGLLRWEDG
KDHQLPQDFA DMLGWRELAA KVDAAYAAAP DPESTIVLCD NYGQAGAINY YSKMGVKAVT
FNADYVNWFD LNQRYKHLIR VKTGGEREEE MKETGPLFAT GYAADSVTNR FAREHGTVVF
VFLDARVDVN ARLEKEIAEE RW
|
|---|
| |