Gene Dfer_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2172 
Symbol 
ID8225744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2655503 
End bp2656102 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content45% 
IMG OID644930009 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003086560 
Protein GI255035939 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATCC TCGAACGAAA AATACGGCAG AAAGAAAATA TGCGCACCAA TATCCTGGCG 
GTAGCCTTGC AATTGGTGAA GGAAGAAGGC TGGCAATCCC TGTCAATCAG GAAGATAGCT
GATGCCATCG AATATAGCGT ACCGGTGATC TACGATCACT TCGAAAATAA AGAAGCGATC
CTCTTTGAAC TTTCTATGGA TGGTTTCCGG TTACTCGATA GATTATTGGA AAAAGACAAG
CGTAAATACG CAGATCCGGA GGAGCGGCTA AGGGCCCACG CCGAAACTTA CTGGACCTTC
GCTTTCAAAA ATCCCGAATA CTATCAGCTC ATGTACGGTT TGGGAATGCC CTGTTCCAGC
CCGGGCAAAG CGAAACCGGA GTTCAACAGC TTCCGCGATC ACATAGGCGA GGCTATTGAA
GGAATCGTAA AAGATAATAA ATCTTCCGAT GAGGAAACTT GCTTTAAAAT TCATGCGTTC
TGGTCAGTAC TCCACGGCTT GATTTCGATC GTAATGATGC GCTGCTCGGA TATCGACGAC
ACTCAGATGA ACAAAAAAGT AATGGACGAC ACTGTAAACG CATTCATCAA AAATCTCTAA
 
Protein sequence
MGILERKIRQ KENMRTNILA VALQLVKEEG WQSLSIRKIA DAIEYSVPVI YDHFENKEAI 
LFELSMDGFR LLDRLLEKDK RKYADPEERL RAHAETYWTF AFKNPEYYQL MYGLGMPCSS
PGKAKPEFNS FRDHIGEAIE GIVKDNKSSD EETCFKIHAF WSVLHGLISI VMMRCSDIDD
TQMNKKVMDD TVNAFIKNL