Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2172 |
Symbol | |
ID | 8225744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2655503 |
End bp | 2656102 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644930009 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003086560 |
Protein GI | 255035939 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATCC TCGAACGAAA AATACGGCAG AAAGAAAATA TGCGCACCAA TATCCTGGCG GTAGCCTTGC AATTGGTGAA GGAAGAAGGC TGGCAATCCC TGTCAATCAG GAAGATAGCT GATGCCATCG AATATAGCGT ACCGGTGATC TACGATCACT TCGAAAATAA AGAAGCGATC CTCTTTGAAC TTTCTATGGA TGGTTTCCGG TTACTCGATA GATTATTGGA AAAAGACAAG CGTAAATACG CAGATCCGGA GGAGCGGCTA AGGGCCCACG CCGAAACTTA CTGGACCTTC GCTTTCAAAA ATCCCGAATA CTATCAGCTC ATGTACGGTT TGGGAATGCC CTGTTCCAGC CCGGGCAAAG CGAAACCGGA GTTCAACAGC TTCCGCGATC ACATAGGCGA GGCTATTGAA GGAATCGTAA AAGATAATAA ATCTTCCGAT GAGGAAACTT GCTTTAAAAT TCATGCGTTC TGGTCAGTAC TCCACGGCTT GATTTCGATC GTAATGATGC GCTGCTCGGA TATCGACGAC ACTCAGATGA ACAAAAAAGT AATGGACGAC ACTGTAAACG CATTCATCAA AAATCTCTAA
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Protein sequence | MGILERKIRQ KENMRTNILA VALQLVKEEG WQSLSIRKIA DAIEYSVPVI YDHFENKEAI LFELSMDGFR LLDRLLEKDK RKYADPEERL RAHAETYWTF AFKNPEYYQL MYGLGMPCSS PGKAKPEFNS FRDHIGEAIE GIVKDNKSSD EETCFKIHAF WSVLHGLISI VMMRCSDIDD TQMNKKVMDD TVNAFIKNL
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