| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2167 |
|---|
| Symbol | |
|---|
| ID | 8225739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2650278 |
|---|
| End bp | 2651261 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644930004 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003086555 |
|---|
| Protein GI | 255035934 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTT TAGTAACTGG CAGCGCGGGG CATTTGGGCG AGGCGCTGAT GCGGACATTC
CGGGCGCAGG GAACACCGGC CATCGGTGTG GACATCAAGC ATTCCGAATA CACCGACCGG
GTAGGGAACA TTGCCGACAG GGATTTTGTC AAAGCCGCCA TGCGCGGCAT TCGCACCGTC
ATTCATACCG CTACCCTGCA TAAACCGCAC GTAGCGACGC ACACCAAGCA GGATTTTGTA
GATACCAACA TTACCGGTAC GCTCAACCTG CTGGAAGAAG CGGTAGGAAG CGGCGTATCG
TCATTCGTTT TCACAAGCAC CACCAGCACA TTCGGAGCGG CCATGAACCC GGCGAAAGGT
GCCCCGGCCG CGTGGATCAC CGAAGAGGTG GTGCCGCAGC CCAAAAACAT TTACAGCGTA
ACCAAGCTGG CCGCCGAAAG TCTCTGCGAG CTGTTTCACC GTAAAACACG CCTGCCGGTG
CTGATCCTGC GCACCTCGCG CTTCTTTCCC GAGGACGACG ACAATGCCGA AACGCGCCGT
CTTTACAACA CTCCCAATGT GCAGGCGCTT GAATTGCTCT ACCGGCGTGT GGATATCGCC
GACGCCGTTT CCGCGCATCT GTTAGCCATG GAAAAAGCCG GAACGATCGG TTTCGGCAAG
TACATAATCT CGGCAACCAC GCCGTTCACG CAGGCGCATC TGGCGCAACT GCATACCGAT
GCCCCGGCGG TCATCCGCTC GTTGTACCGG GAAAGTGAGT CGCTGTTCAC TGCCCACGGC
TGGAAGTTCT TCCCGGAGAT GGATCGCGTG TATGTGAATG AGCGCGCGCG GCGCGAGCTG
GGATGGGCGC CGGTTTATGA CTTCGCGCAC GTGTTGCGCT GCCTGCGTGA AGATACCGAT
TTCCGCAGCC CGCTTGCGGT GCAGGTCGGA AGCAAGGGCT ACCACGACGA GCAGTTCGAT
GAAGGGCCGT TCCCGGTGGA ATAG
|
|---|
| Protein sequence | MSILVTGSAG HLGEALMRTF RAQGTPAIGV DIKHSEYTDR VGNIADRDFV KAAMRGIRTV
IHTATLHKPH VATHTKQDFV DTNITGTLNL LEEAVGSGVS SFVFTSTTST FGAAMNPAKG
APAAWITEEV VPQPKNIYSV TKLAAESLCE LFHRKTRLPV LILRTSRFFP EDDDNAETRR
LYNTPNVQAL ELLYRRVDIA DAVSAHLLAM EKAGTIGFGK YIISATTPFT QAHLAQLHTD
APAVIRSLYR ESESLFTAHG WKFFPEMDRV YVNERARREL GWAPVYDFAH VLRCLREDTD
FRSPLAVQVG SKGYHDEQFD EGPFPVE
|
|---|
| |