Gene Dfer_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2161 
Symbol 
ID8225733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2643276 
End bp2644310 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content52% 
IMG OID644929998 
ProductWD40 domain protein beta Propeller 
Protein accessionYP_003086549 
Protein GI255035928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.143673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTAT GCGAATACAA ACTTAAAATC GCCGATATGA GAAGGACCCT TCCTGCCATT 
ATCCTGCTTC TGGTCGCCGG CTGCTGGCCT CCGGGAATGG ACCCGGATAG AAAAGACGGC
AAGTTTTTAT CCGACGTCGT CAATCTGGAA GAGTTCAATT CCGAGTATGA CGACTATAAC
TCCGATCTGC CGTCCAATCG GTATGGCGAA ACGCATTTGG TATTTTCCTC CAAAAGAGAG
AGGAAGGATT TGCTGAACCT CGTGTACTTC CCGGCATTCA TGGAGTACGA CAAAGGGCTT
CAACTCAAAA AAGGCACCGA GCGCGCGGGC GGAGATTACC ATGAAAGCTT TTCGGGTGCC
GCGCAGCTGA TCAACAAGGC AAACGGCAAT TTTAATGTGT ATGGCCCGCG CCTGATGTCG
CACTACCGCG ATTACACATC CGTTGGAAAC ACAAAAAGTC TGTGGCTGTT TTATGCCGAC
GACGCGTCCG GCGATATGGA CATCAAATAC GTCCAAAAAG GAGACGAAGC GCCCGCACCC
GTGCAATACC TCAATTCCCC GGCCGACGAT GCGTATCCGA CGATTTCATT TATGGGAGAT
AAAATCTACT TCTGCTCCAA CCGCGACGGC AATTTCGATA TTTTCGAAGT AACGATCCCG
CGAGACGAAC GTGAGGAAAT TACGCTGGAA AGCCTGGTTA ACCCTTCCAA ATACGAAATC
CGAAAGATGG ACGAACTATC GGGGGCCTAC AACGACAAGT GCCCTTACCT GTACGACAAC
GTAATGGTGT TTGTGTCCGA CCGTCCCGGT GGGCAGGGCG GCGAGGACAT TTACTACTCC
GAATACATCG ACGGCAAATG GTCGGCGCCG GTCAATGCGG GCCCGCGGAT CAACACCGCC
CACAATGAAT ACCGCCCCAT TCTCCCCAGC TTGCCCAATT TCAATTACCA CCTGATGATC
TTCTCCTCCA ACCGCCCTGG CGGCAAGGGT GGCTACGACC TCTATATGAC CGGGTTGAAA
GAACGACGGT GGTAG
 
Protein sequence
MCLCEYKLKI ADMRRTLPAI ILLLVAGCWP PGMDPDRKDG KFLSDVVNLE EFNSEYDDYN 
SDLPSNRYGE THLVFSSKRE RKDLLNLVYF PAFMEYDKGL QLKKGTERAG GDYHESFSGA
AQLINKANGN FNVYGPRLMS HYRDYTSVGN TKSLWLFYAD DASGDMDIKY VQKGDEAPAP
VQYLNSPADD AYPTISFMGD KIYFCSNRDG NFDIFEVTIP RDEREEITLE SLVNPSKYEI
RKMDELSGAY NDKCPYLYDN VMVFVSDRPG GQGGEDIYYS EYIDGKWSAP VNAGPRINTA
HNEYRPILPS LPNFNYHLMI FSSNRPGGKG GYDLYMTGLK ERRW