| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2139 |
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| Symbol | |
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| ID | 8225711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2612121 |
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| End bp | 2613506 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644929976 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_003086527 |
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| Protein GI | 255035906 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.22069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.491998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA AAAATCTGCT TTTGGCCTTC TATGGCGACG ATTTTACCGG CTCAACCGAC
GTCCTGGAAA CCCTCGAACG CGCCGGCATC CGCACGGCGC TATTCATGGC GCCGCCCACG
CCGGAAGACC TGGTCCGCTT TCCCGACATC CGGGCATTCG GCATTGCAGG CATGACGCGC
GCCATGACGC CCCCGCAAAT GGAGAAAACG CTTATGCCGG CATTCGCGGC GCTCAAAAAA
TCCGGCGCGC GGCATATTCA TTATAAGGTT TGCTCCACAT TCGATTCTTC ACCTGCCATC
GGCAGCATTG GCAAGGCCAT TGAGGTGGGG ATTGAAATGT TTAATCCGCG CTTCGTGTCG
CTGATCGTCG CGGCGCCCGC ACTGGGGCGG TACTGCGCGT TCGGGAACCT GTTTGCACGG
ATGGGCATCG GCAGCAACGG CCACATCCAC CGGCTCGACC GCCATCCAAG CATGAGCAAG
CACCCCACCA CACCAGCCGA CGAGGCCGAT CTGCGGCTGC ATTTGAGCAA ACAAACCTCA
AAAACCTGCG GATTGCTCGA TATTCTGCAA ATTGAAGGCG AGCCGCGGGA AGCGGCCGCT
GCGCTCGAAA ACACGGTTCG GGAGAACGAT ATTGTGCTTT TCGACGCGCT ATACCCGCAC
CAGATGTTAC GCATCGGCGA GCTGATCGAT CCTTTCGGTA GTCCGAACGC ACCGCAGTTT
TCCGTCGGCT CATCGGGCGT TGAAATGGCG CTTACGGCCT GCTGGAATAA TGCCGGCATC
GCACGAAACC GCACCGAATG GCCCGAACCC GGCGAAGTGT CGCCGCTGCT TGTCGTATCG
GGCAGCTGCT CCCCCGTCAC ATCCCGCCAA ATCACCTACG CACTGGCGCG GGGTTTTGAA
GAAATTGCGC TGGACACCCC CGCTATCGCA ACCGGAATGC ATGATCCGAC CTTCGCTGAT
GATACACAAA AGGTCGTCGA ATTCTTGCGT CGCGGGCGGA GCGTGATCAT ACACACCAGC
AAAAGCACGA AGGATGAACG TTTCACGGCA TCCAATAATA TCCTCAAAAA CAAGGGATTA
TCTGCAACTG AAATTCAAAC CCGCACTTCT TCCCTTTACG GCGAAGCGCT CGGCCGCATT
GCCCGCGCGG CAATGGCCAG CATTTCAGTC CGACGGCTGG TCATCGCCGG GGGCGACACA
TCCGGTGCCG TCGCCAAAAC ATTGGGTATC AACGCCCTTT CGATGATTGC CCCCCTATCG
CCCGGAGCAC CACTATGCCG CGCACACGCC CCCGGCTCCC CGGCAGACGG CCTGGAAATA
AATTTCAAAG GCGGACAAGT TGGCGGCGAG GACTATTTTG AAGTGCTGAG AAGAGGGAAG
TTTTGA
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| Protein sequence | MSAKNLLLAF YGDDFTGSTD VLETLERAGI RTALFMAPPT PEDLVRFPDI RAFGIAGMTR
AMTPPQMEKT LMPAFAALKK SGARHIHYKV CSTFDSSPAI GSIGKAIEVG IEMFNPRFVS
LIVAAPALGR YCAFGNLFAR MGIGSNGHIH RLDRHPSMSK HPTTPADEAD LRLHLSKQTS
KTCGLLDILQ IEGEPREAAA ALENTVREND IVLFDALYPH QMLRIGELID PFGSPNAPQF
SVGSSGVEMA LTACWNNAGI ARNRTEWPEP GEVSPLLVVS GSCSPVTSRQ ITYALARGFE
EIALDTPAIA TGMHDPTFAD DTQKVVEFLR RGRSVIIHTS KSTKDERFTA SNNILKNKGL
SATEIQTRTS SLYGEALGRI ARAAMASISV RRLVIAGGDT SGAVAKTLGI NALSMIAPLS
PGAPLCRAHA PGSPADGLEI NFKGGQVGGE DYFEVLRRGK F
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