Gene Dfer_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2060 
Symbol 
ID8225632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2511048 
End bp2512400 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content53% 
IMG OID644929897 
Producthypothetical protein 
Protein accessionYP_003086448 
Protein GI255035827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.895563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAG CTCTCCTTTT GCTGGGTATG ATCGGGACCG GCCTGCTGGC ACCGATGCGA 
ACAATGGCGC AGTTCAGCCT TTCGGGTCAG TTACGGACCC GGACGGAGTT GCTTGACGGA
CAGGGCACGA TGCTTTCCAA GGGGGAAAAG CCGGCCTTTT TCACTTCCCA GCGTACCCGT
CTGAATGCAG GCTACAAGGG TTACCGGACG CAGTTTTTCG TGGCTGTGCA GGATGTGCGC
GTGTGGGGGC AGGACGCTTC TACCAACAAC CGCATCACCA ACTCGGCCCT CAATGGGCTC
ATGCTGCACG AAGCCTGGGG GGAAATCAGC CTGCTGGATA CCAACCAGAC CAAGCTCGGA
AAAGAGTTCG CATTGAAGAT CGGGCGGCAG GAATTTGTTT ACGACGACAG CCGCGTGCTC
GGCAATCTCG ACTGGCTGCA ACAGGCCCGG CGGCATGATG CGGCTTTGAT CAAGTACGGT
TTTAATGGTT TTACTGCGCA TCTGGGCGTT GCGTATAACC AAAACCGTGA GTTCAAAACC
GGCACTTTGT ACGACGGTGT GCCCATAGGT TATCCGGCCG GCACGAACGG GATCGGGACG
ATGTACAAGT CATTGCAGTT TTTGTATTTG GGTAAAAAAT TAAAGAGTGG AAATGCTTCG
TTCTTGGCTG TAAAGGATGA TTTTCAAAAA TATACATTGG ATACGGCGGG TGTAAAAAAG
CTGGCTGACG GTGTGCGGAG CCGGGTGACG TTTGGGCCCT ATCTGCAAAC TAAAATCGGC
AAAAACTGGA CATTGACCGC CAATGCGTTT TACCAGGCAG GGAAAGACAA AGACGGTGCG
TCGCTGAGCG CCTATATGTA TTCTGTCCGG GGGATGTATG CGATGAACCG GGTATTTTCC
ATTGGTCCCG GCTTCGACTA CACCTCCGGC ACAGTGTCCG GCTCCTCGAA AAACCACACG
TTCGACCCGC TTTACGGCAC GCCGCACAAG TTTTGGGGAC AAATGGATTA CTTCTATGCG
GCTAATGCGT TCGGCAAGGG CGGACTTTCG GACCTTTACA TTAATACCAC GATCAAAGCC
TCCGAAAAGC TTTCCTTCAA CACCGATCTG CACCATTTTT CCAGCGCAGC CACCGTGCGC
GTTGCTGATA ATCAGAAGCT CTCATCCGGC TTCGGCGAAG AACTCGACAT TATCGCGAAT
TACAACCTGA CGAAAAGCAT CAGCTTCCAG GGCGGCTACT GCGCCTTTTT CTCGACCAAC
AGTCTGGCAC AGGTGAAGGG CGTGAAAAAT CCGCAGAAAA TGTCCAACTG GGCCTACCTG
ATGATCAATA TCAAACCTGA ATTCCTGAAA TAA
 
Protein sequence
MKRALLLLGM IGTGLLAPMR TMAQFSLSGQ LRTRTELLDG QGTMLSKGEK PAFFTSQRTR 
LNAGYKGYRT QFFVAVQDVR VWGQDASTNN RITNSALNGL MLHEAWGEIS LLDTNQTKLG
KEFALKIGRQ EFVYDDSRVL GNLDWLQQAR RHDAALIKYG FNGFTAHLGV AYNQNREFKT
GTLYDGVPIG YPAGTNGIGT MYKSLQFLYL GKKLKSGNAS FLAVKDDFQK YTLDTAGVKK
LADGVRSRVT FGPYLQTKIG KNWTLTANAF YQAGKDKDGA SLSAYMYSVR GMYAMNRVFS
IGPGFDYTSG TVSGSSKNHT FDPLYGTPHK FWGQMDYFYA ANAFGKGGLS DLYINTTIKA
SEKLSFNTDL HHFSSAATVR VADNQKLSSG FGEELDIIAN YNLTKSISFQ GGYCAFFSTN
SLAQVKGVKN PQKMSNWAYL MINIKPEFLK