| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2043 |
|---|
| Symbol | |
|---|
| ID | 8225615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2488804 |
|---|
| End bp | 2489898 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644929880 |
|---|
| Product | Mannan endo-1,4-beta-mannosidase |
|---|
| Protein accession | YP_003086431 |
|---|
| Protein GI | 255035810 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4124] Beta-mannanase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.89512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.955908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGT TGAGTACTGT ATTATGCACC GGCACTGCCA TTGCGCAAAT AGATACCAAA
GCAACGCCGG AAACCGCAGC GCTCTACAGG AACCTCAAAA AGCTTTCTGA ACAATACATT
CTGTTTGGCC ACCAGCACGC TATCGAATAC GGGCACGGAT GGTCGGGCGA TGCGGAACGG
TCGGACGTGA AGTCGGTTAC GGGCTCGCAT CCGGCTGTGA TAGGCGTCGA TTTGATGGGC
CTTTCGGGCC GTCCGGCGGA GGAGATCGCC AAAACGGCGG CTGCATTGCG GAAAAATGTG
GTGGATACCT ATAATCGAGG AGGGATCACG ACGGTGGCCT GGCATTTTGC CAATCCAGCC
TCCGAAGGCG GTTTTTATTG GAAAGATGGT GTATCAAAAC CCGCCATGTC GCTGATCAAA
CCCGGCGGAT CGCATCACGA AAAGTACAAG CTGATACTGA AAACGATAGC CGATTTTGCC
CACTCCGTAA AAGGAAAGGA CGGGACGCTG GCACCCATGA TTTTCAGACC GTTTCACGAA
TTTGATGGCG ACTGGTTCTG GTGGGGCAAG GGGCACACCA AACGCGAAGA CTTTATCGCC
GTCTGGCGGT TTACCGTATC CTATCTCCGC GATCAAATGG GCGTTCACAA CCTCATTTAC
GCGTTTTCGC CCGATAATAA GTTCACTTCG GAATATGAAT TTCTCGAACG CTACCCGGGC
AACGAATGGG TGGATATGGT GGGAATGGAC AACTACGGTG ATTTCGGCCG CGACGGGAAA
TACAACCTCG AAGCCGGCTC GAAGAAGCTC AAAATTGTAT CGGAATATGC CCAGAAAGCC
GGCAAACTCG CCGCATTCAC TGAAACCGGC CTCGAAAGCA TTCCTAACCC GACCTGGTGG
ACCGAGACAT TGCTTAAAAC ATTGAAAACC GAAAAACTGC AACTCGCCTA CGTGCTCGTC
TGGCGCAACG ATTCCAAAAG CCCCACCCAT TTTTACGCCC CCTTCCCCGG GCAGATCAGC
GCTGCCGACT TCGTAAAGTT TTATCACGAT CCTTACACGC TTTTCGAGAA GGATTTGAAG
GAAGTGTATC GGTAA
|
|---|
| Protein sequence | MSLLSTVLCT GTAIAQIDTK ATPETAALYR NLKKLSEQYI LFGHQHAIEY GHGWSGDAER
SDVKSVTGSH PAVIGVDLMG LSGRPAEEIA KTAAALRKNV VDTYNRGGIT TVAWHFANPA
SEGGFYWKDG VSKPAMSLIK PGGSHHEKYK LILKTIADFA HSVKGKDGTL APMIFRPFHE
FDGDWFWWGK GHTKREDFIA VWRFTVSYLR DQMGVHNLIY AFSPDNKFTS EYEFLERYPG
NEWVDMVGMD NYGDFGRDGK YNLEAGSKKL KIVSEYAQKA GKLAAFTETG LESIPNPTWW
TETLLKTLKT EKLQLAYVLV WRNDSKSPTH FYAPFPGQIS AADFVKFYHD PYTLFEKDLK
EVYR
|
|---|
| |