Gene Dfer_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2012 
Symbol 
ID8225584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2452396 
End bp2453469 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content53% 
IMG OID644929849 
ProductADP-heptose:LPS heptosyltransferase-like protein 
Protein accessionYP_003086400 
Protein GI255035779 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAG AACGCTTCAT TCAGCTGTGG ACGCACCGCT ACCATAAATA CACACACATT 
GCCACGGCGC ATTTAAAAGG CCGCCAGGCC AGGGCGCATT TCCAGGGCGT AAAACGTGGA
CTGAAAAAGG GGCAGGAGCT GATCGCGATC ATTCGTACGG AGCATTTCGG GGATATCGTG
GCCGCCGAGC CGATCTCGCG TTATGTGCGC CAGCAGCATC CCGATGCGCA TATCGTATGG
TTCGCGAAAC CCGGCTTTGC CGAGCTGGTG AGCCATAACC CGAATGTGGA TGAGGTTTTC
AGGGAGATTT GCGTTACCGA ACGGCGGGTT CTGCTGGAAG GCAAAGTGTT CGATAAGGTG
TTTGAACTGC AATTCAGGAA CAACAATCAT TGTCCCAAAT GCCAGGTTTT TACCGAAAAT
CCCGTTGCGT TAGAGCGGGA TATTAATGTG TTCAACTACT TCGATTATGG GAATCTGCTG
GAAGTTTTCG CGCAGACAGG CGGGCTGATT CCCCCGAAAA CGGCGTTTCC GGCCGACGAT
CAGCCGCGAT TGTATTTGCA GCCGTCGCAT CAAGCGAAAG TCGACGGCCT TGATTTACCC
GGAAAATACA TTGTCATGCA TTGCCGCTCG AATTACGAGC CCAAAGACTG GCCGGCCGAT
CGCTGGAACC AGCTGGTGCA TTGGTTGGCG GAAAAGTATG ATTACCAGCT CGTTGAAATC
GGTTTGGAGA GTAATTTAAA TGTAAAAACA CCCGCATACC GCAACTTGTG CGGCCAGCTG
AGTATCCTCG AAACGGCAGA AGTGATCCGC CGGGCGTCGT TTTTCATCGG GCTGGACAGC
GGGCCTTCGC ATTTGGGCAA TGCCACCGGC ACATTCGGCA TTATATTGAT GGGAGCGCTC
AATAACTTCC TGAATTACAA TCCGTATTCG GGCAAATATG GCCGGCAGGA GAATGCGTTG
CTGGTGCGCA AGGCGGGCTT GCCGTGTGCG CAGCTCCCGT TCGAATTTGT GCAGGAACAA
GTGCGATCGG TGCTCGAAAA GAGTGCCGAC AATGCGCGTA CAGTGCTATC GTGA
 
Protein sequence
MTIERFIQLW THRYHKYTHI ATAHLKGRQA RAHFQGVKRG LKKGQELIAI IRTEHFGDIV 
AAEPISRYVR QQHPDAHIVW FAKPGFAELV SHNPNVDEVF REICVTERRV LLEGKVFDKV
FELQFRNNNH CPKCQVFTEN PVALERDINV FNYFDYGNLL EVFAQTGGLI PPKTAFPADD
QPRLYLQPSH QAKVDGLDLP GKYIVMHCRS NYEPKDWPAD RWNQLVHWLA EKYDYQLVEI
GLESNLNVKT PAYRNLCGQL SILETAEVIR RASFFIGLDS GPSHLGNATG TFGIILMGAL
NNFLNYNPYS GKYGRQENAL LVRKAGLPCA QLPFEFVQEQ VRSVLEKSAD NARTVLS