| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2011 |
|---|
| Symbol | |
|---|
| ID | 8225583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2451742 |
|---|
| End bp | 2452404 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644929848 |
|---|
| Product | alanine racemase domain protein |
|---|
| Protein accession | YP_003086399 |
|---|
| Protein GI | 255035778 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCCA TAGCCGACAA TCTGGCCCAG ATCGAACAAG CATTACGTAA GGAAACACGT
CTCGTAGCGG TTACAAAAAC CAAGCCAACC ACATTGCTGA TGGAGGCCTA CGAGGCCGGG
GCGAGGCTTT TCGGGGAAAA CAAGGTGCAG GAGATGGTGG CTAAATACGA GGAACTGCCC
AAGGACATCG AGTGGCACAT GATTGGGCAT TTGCAGACCA ACAAGGTCAA ATACATGGCG
CCGTTTGTAA GCCTGGTGCA TTCGGTGGAT AGTTTCAAAC TGCTTAAAGA AATCAATAAG
GAAGCGCGCA AGAACGACCG CATTATCGAC TGCCTTCTGC AAATCTATAT TGCCCGCGAG
GAAACCAAAT TCGGCCTTTC GGAAGACGAA GCCCTTGCGC TCATCACCTC CCCGGAGCTT
GCCACGCTGG CAAATGTTCG CATCGCAGGG CTGATGGGCA TGGCTTCCAA TACCGACGAC
CAGGAAGCAG TGAGAAGTGA GTTCCGCGGG CTGAAAAGCA CTTTCGAAGC GTTCAAAAAC
CATGAAAACG CACAGGTAAC GATGCGCGAA CTTTCCATGG GGATGAGCGG CGACTACCTC
ATCGCGATGG AAGAAGGCAG CACGCTGGTA CGCGTGGGAA GCGCCATTTT CGGCTCACGA
TAG
|
|---|
| Protein sequence | MPSIADNLAQ IEQALRKETR LVAVTKTKPT TLLMEAYEAG ARLFGENKVQ EMVAKYEELP
KDIEWHMIGH LQTNKVKYMA PFVSLVHSVD SFKLLKEINK EARKNDRIID CLLQIYIARE
ETKFGLSEDE ALALITSPEL ATLANVRIAG LMGMASNTDD QEAVRSEFRG LKSTFEAFKN
HENAQVTMRE LSMGMSGDYL IAMEEGSTLV RVGSAIFGSR
|
|---|
| |