| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1986 |
|---|
| Symbol | |
|---|
| ID | 8225558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2427804 |
|---|
| End bp | 2428436 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644929823 |
|---|
| Product | outer membrane lipoprotein carrier protein LolA |
|---|
| Protein accession | YP_003086374 |
|---|
| Protein GI | 255035753 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCA TTAGCATATT TGGCATAATA GCCGTTTTGA TGGCGGCGCA TTGTGCGCAG
GCTCAGTCGT TTAAGCCGGT GGCTCATCCG GAGAAGGTGC TGGCCGAGTT GCGGAAAACG
TCGCAGGCAA CGACGTCCAT TCAGGCATCG TTCACCGAAG AGAAACAATT GGCCGTGCTG
AAAGAGCCGG AAAAATCGTC GGGGCTGTTC TATTACCAGC AAAAGAACAA AATGCGCTGG
GAGCAGCGGA CGCCTTCGAA ATACATTATC CTCATCAACG GCGATAAGTT GCGCGTGCAG
GAGGGAAACA AGGAAAAAAA CGTAGGCCAG GCCGGTCGCA TGGCGGCGCA GATCAAGGAG
CTGATGATCG GGCTCGTGAA TGGTGATTTT CAGCAAAATA AGGGTTTTTC GTCGGCTGTG
CTGGAAGATG GAGACCAGTA CCAGATCGTG CTCACGCCCG TGAACCGCCG TTTGAAGAAC
ATTTATTCCA AAATTGCGAT GAATTTTTCC AAAAGTTCGC TTCGGTTAAA GGAGCTCGCG
TTTTTCGAGA AAGGCGGCGA CAAGAGCGTG ATGAAATTCC AGCAGGAAAA GTTCAATCAG
CCCATTTCCG AAAACCTGTT TAAAGACCTT TGA
|
|---|
| Protein sequence | MKSISIFGII AVLMAAHCAQ AQSFKPVAHP EKVLAELRKT SQATTSIQAS FTEEKQLAVL
KEPEKSSGLF YYQQKNKMRW EQRTPSKYII LINGDKLRVQ EGNKEKNVGQ AGRMAAQIKE
LMIGLVNGDF QQNKGFSSAV LEDGDQYQIV LTPVNRRLKN IYSKIAMNFS KSSLRLKELA
FFEKGGDKSV MKFQQEKFNQ PISENLFKDL
|
|---|
| |