| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1982 |
|---|
| Symbol | |
|---|
| ID | 8225554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2422261 |
|---|
| End bp | 2423511 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644929819 |
|---|
| Product | drug resistance transporter, Bcr/CflA subfamily |
|---|
| Protein accession | YP_003086370 |
|---|
| Protein GI | 255035749 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC GTAAGTCCAT GAGCCGTAAG CAATATTTCT TTATTATCCT GATCCTCGGA
TCGCTGGCGA CCGTCAGCCC TTTCTCGATC GACATGTATC TTCCGGGCTT CCCGAGGATC
GCGTCGGATC TTCAAACCAC TATCGACAAA GTACAACTTT CGCTAACAAG CTATCTCATT
GGTATTTGTA TCGGACAAGT GCTGTACGGG CCACTGCTGG ATCGCTTCGG CAGGAAGAAG
CCGCTCTATG TGGGACTGGC CCTTTACGTG ATTGCCTCGT TCGGATGTGC GATGACTTCG
TCCGTCGATG CGCTGATCGC CATGCGGTTC TTCCAGGCCA TGGGCGGGTG TGTTGGACTC
GTAGCTTCGC AGGCGCTCGT GAGCGACCTT TTTCCGGCCG ATAAGCGCGC CGAGGTGTTT
TCCCTTATTA CGCTGGTGAT CGCCGTTTCG CCGATGATCG CCCCCACAAT CGGCGGCTAT
GTTACCGCTT CTATCGCCTG GTACTGGATT TTTGTGATCC TGGCCGGTAT CGTAAGTCTG
ATTATCCTTG CCATTTATTT CTTTTTACCC ACCGGTCGTG ATGCCGATAG TTCGGTTTCG
CTCCGGCCCG AGGCGGTTTT GGGCGGGTAT CTTACCGTGA TCTCGCAGCC GCAATTCCTC
ATTTATACCC TGGCGGGCGG CTTGGCAACG GCTGCCCCAT TCGCCTACAT TTCGGGTTCA
TCCGATGTTT TTATGAACAT CTACAAGGTT TCCGAGCAGC AGTATGGCTG GATTTTCGCT
TTCCTGGCCG TTGCCATGAT CGGTTCGACG CAGCTGAACC ACTTTTTGCT TAAAAAATAC
AGCAGTGAAC AAATCATCCG CTTCACGCTG ATCTACCAAA GTGTGGTAGG CGTCGTCCTC
ATTCTGGGCG TTTATAACAA TTGGTTTGGC CTCTATTCCC TCATCGGGAC GATGTTCGTG
TTCCTCACCG GACAGGGACT CACAGGCCCG AATGCCTCGG CGCTTTCTCT CGCGCCATTC
CGCAAGCATA CCGGCAGCGC GTCCGCGCTG ATGGGCAGTT GGCGTATGGG TGCAGGAGCG
GTGATTTCTG CCATAGTCAG CTTTCTGCAC AACAATACCG CCATGCCGAT GGTGGGCATG
ATGGCCTTTT GCGCCTTCGG CGGTCTGGTC ATCCTGCAAG CGGGCAATGT CGTGGTCCGT
CACCGCGCTG CCAGCCGGGA TGTGGAGGAA GAGGTTTCAG TCCTGCTCTA A
|
|---|
| Protein sequence | MSERKSMSRK QYFFIILILG SLATVSPFSI DMYLPGFPRI ASDLQTTIDK VQLSLTSYLI
GICIGQVLYG PLLDRFGRKK PLYVGLALYV IASFGCAMTS SVDALIAMRF FQAMGGCVGL
VASQALVSDL FPADKRAEVF SLITLVIAVS PMIAPTIGGY VTASIAWYWI FVILAGIVSL
IILAIYFFLP TGRDADSSVS LRPEAVLGGY LTVISQPQFL IYTLAGGLAT AAPFAYISGS
SDVFMNIYKV SEQQYGWIFA FLAVAMIGST QLNHFLLKKY SSEQIIRFTL IYQSVVGVVL
ILGVYNNWFG LYSLIGTMFV FLTGQGLTGP NASALSLAPF RKHTGSASAL MGSWRMGAGA
VISAIVSFLH NNTAMPMVGM MAFCAFGGLV ILQAGNVVVR HRAASRDVEE EVSVLL
|
|---|
| |