Gene Dfer_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1981 
Symbol 
ID8225553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2421304 
End bp2422245 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content55% 
IMG OID644929818 
ProductInosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_003086369 
Protein GI255035748 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.842213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC TACCCGTTAT CATCGACTGC GACCCCGGCC TGGACGACGC CGTAATGCTC 
ATGCTTGCAC ATGGCAGCGG CCAGCTGGAC ATCCGGGCCG TTACCATTTC CGCCGGAAAT
CAGACCCAGG AAAAAACCAT GCTGAACGCG TTGAAAGTGC TTTCGCTCAT TGGCGCCACC
GACATTCCGG TGTACCACGG CGCCGAGAAT CCGCTGTTCC GTGAACTGAT TGCGGACGGT
GTGGTTCATG GCGAATCCGG CCTGGATGGG CCTTCGCTGC CGATCCCTGA CATGCGCCCG
CAGCCGGAAA ACGCCATTCA AGGCATCGCG TCGGTGCTCG CCGCTTCGGA GACGTCCGTG
ACGATCGTTC CCACAGGCCC GCTGACAAAC ATTGCCACAT TTCTCCTGGC TTATCCGCAT
TTGAAACCGA AAATCGCGCG CATTTCGCTC ATGGGCGGCG GCATTTTCCG TGGCAATATG
ACGCCCCTGG CTGAATTCAA CATTTACACC GACCCGGAGG CCGCAGCCAT TGTATTCAAA
TCAGGCGTTC CCATCACCAT GTGCGGGCTC GATGTGACCC ATAAGGCGCT GGTATTTCAA
AAAGATATTG AATTGCTGCG GGCACTAGGC AACCAAACCG GCAAAGTAGC CGCCGATCTG
ATGGATTTCT TCTCCATTTA CTATCGCGAA AACCGTGTGG AATTGAATGG TGGTGCGGCA
TTGCATGATC CATGCGCTAT CGCGTGGCTG CTGAACCCGG GGATATTCAG CACAAAATCG
TGCTATGTGG ATGTGGAAAC AAAGGGAGAA CTAACGCGCG GTGCCACGGT GGTGGATTTT
TACAACACAT TACATCGGGA GCCGAACGTG ACGGTAGCCT ATGACCTGGA TCGCGACGCA
TTTATTGATA TGCTGTTTAA TGCGATCAAG GCATTGCCTT AG
 
Protein sequence
MNKLPVIIDC DPGLDDAVML MLAHGSGQLD IRAVTISAGN QTQEKTMLNA LKVLSLIGAT 
DIPVYHGAEN PLFRELIADG VVHGESGLDG PSLPIPDMRP QPENAIQGIA SVLAASETSV
TIVPTGPLTN IATFLLAYPH LKPKIARISL MGGGIFRGNM TPLAEFNIYT DPEAAAIVFK
SGVPITMCGL DVTHKALVFQ KDIELLRALG NQTGKVAADL MDFFSIYYRE NRVELNGGAA
LHDPCAIAWL LNPGIFSTKS CYVDVETKGE LTRGATVVDF YNTLHREPNV TVAYDLDRDA
FIDMLFNAIK ALP