| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1975 |
|---|
| Symbol | |
|---|
| ID | 8225547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2410865 |
|---|
| End bp | 2412043 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644929812 |
|---|
| Product | N-acylglucosamine 2-epimerase |
|---|
| Protein accession | YP_003086363 |
|---|
| Protein GI | 255035742 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.341609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCAT TTACACCCGA AGCTTTTAAG AAAGAATTTA TCGCCATCCT CGATTATTGG
GAAAAATACG GGCTGGACTC CGAAAAAGGC GGTTTTTACG GTCGTGTAAA TTATGAAAAC
CAGCCGGTGA AGGATGCCGC GAAGTCGGTG GTGCTCACGG GCCGGATCTT GTGGACATTC
TCGCTGGCGC ACAGGCTGTT GAAAGAGGCT AAATACCTGA CGCTCGCCGA CCGCGCGTAC
CAGCAGCTTG CCAGGCATTT CTTCGATCCC GAACATGGCG GCGTGTATTG GTCGGTGAAT
GCGGATGGCT CGCCGCTGGA AACGAAGAAG CAGATCTACG GCAATGCGTT CGCGATGTAC
GGTTTAGCGG AATATTACCG CGTCACGCAC TTCAAGCCCG CGCTCGAAAA GGCGCAATCC
CTTTTTGAAA TCATTGAAAA ACATGCATTC GACCCCGTAA ACGGCGGTTA TCGCGAAGCA
TTTGCACGCG ACTGGTCGGC TACCGACGAT TATATCCTCA GTAAAAGTCC GTGGAACAAA
AGCATGAACA CACATTTGCA TCTGGTGGAA GCCTACACCA ATCTGTACAG CGTGTGGCCC
GATGCCAGAC TCAAAAAGCA GACCGCCGGT ATGCTCGACA CGATTATCAC ACGCATTGTA
AATCCCAAAA CCGAAACAAT GCAGCTTTTC TTTGACGAGC AATGGAAAGC GAAGGATAAT
ATCGTTTCGT ACGGGCACGA TATCGAAGCG TCGTGGCTCC TGTTCGAAAC CGCTGAAATA
CTGCACGATG AAAAGCTGAT CGGCCGCATG AAGCAGAAAT CCATCGCCAT GGCCGCCACG
GCCGCGAAGG GACTAGGCGC CGACGGTGCA TTGAATTACG AATACGACCC CGAAACAAAG
CATACCCAAA CCGATCGCAG CTGGTGGGTC GTGGCGGAGC AGCTGGTGGG TTTCTACAAT
GCCTATCAGC TCACCAAAGA TGCGCAGTTC AAAACAAAGG CCGAAAAAAG CTGGGATTAC
ATCGTGAACG AGTTCATCGA CCACGAGCGC GGCGAATGGT TCGGAACGGT GAAGGAAGAT
GGCACGCCGG TGAAGGGCGA CAAGATCAAT TTCTGGAAAT GCCCTTACCA CAATGCGCGG
GCCTGCGCGG AGATGTGGCG CAGGACCGGC AAAGCGTAA
|
|---|
| Protein sequence | MAAFTPEAFK KEFIAILDYW EKYGLDSEKG GFYGRVNYEN QPVKDAAKSV VLTGRILWTF
SLAHRLLKEA KYLTLADRAY QQLARHFFDP EHGGVYWSVN ADGSPLETKK QIYGNAFAMY
GLAEYYRVTH FKPALEKAQS LFEIIEKHAF DPVNGGYREA FARDWSATDD YILSKSPWNK
SMNTHLHLVE AYTNLYSVWP DARLKKQTAG MLDTIITRIV NPKTETMQLF FDEQWKAKDN
IVSYGHDIEA SWLLFETAEI LHDEKLIGRM KQKSIAMAAT AAKGLGADGA LNYEYDPETK
HTQTDRSWWV VAEQLVGFYN AYQLTKDAQF KTKAEKSWDY IVNEFIDHER GEWFGTVKED
GTPVKGDKIN FWKCPYHNAR ACAEMWRRTG KA
|
|---|
| |