Gene Dfer_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1965 
Symbol 
ID8225537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2400112 
End bp2400876 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content58% 
IMG OID644929802 
Productmethionine aminopeptidase, type I 
Protein accessionYP_003086353 
Protein GI255035732 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCA ATAAAGAACA CGAACTAATA GGAATGCAGG AAGCCAGCCG CGCGGTGGCA 
ACCACGTTAC GCGCCATGCG CGAGCACGCC CGTCCGGGCA TGAGCGCGAA GGAACTGGAC
GATTTCGGAG GCGAAATGCT ATCAAGCCTG GGCGCAAAAT CAGCTCCGCG GCTTACTTAT
GGGTTTCCGG GCTGGACGTG CATCAGCGTG AACAACGAAA TCGCGCATGG CGTACCGTCC
GAAACGAAGA TTTTGCAGGA AGGCGACCTG GTGAACATCG ATGTATCCGC CGAGCTCAAT
GGCTTCTGGT CCGATAATGG CGGCTCGTTC GTGCTGGGCG AAGACATCCA CGGGCACGGG
AAGCTGGTAA GCGCGTCGAA ACGCATTCTG AGCAAGGCGC TCGGCCAGGT AAAAGGCGGG
GTGCGGATCG CCGATATCGG GCGGTTGATT GAGACGGAGG CCAAAAAATC GGGTTACAAG
GTAATCAAAA ACCTGGCGGG CCACGGCGTA GGCCGCAGCC TGCACGAAGA ACCGCACGAA
ATTGCCAATT ACTACGATCG CTACAATACC GCGCGCTTCC GCAAGAACAG CGTGGTCGCC
ATCGAGACAT TCATTTCCAC GGCTTCCACA AGCGCCGCGA CGGAGCGCGA CGGCTGGACG
CTCGTAGGCT CACGCGGCGG GTATGTGGCC CAGCACGAGC ACACGATTAT CGTCACCGAC
GGTAAACCGG TGATCCTTAC CGCTATGAAC GGCATTTTCG ACTAG
 
Protein sequence
MSINKEHELI GMQEASRAVA TTLRAMREHA RPGMSAKELD DFGGEMLSSL GAKSAPRLTY 
GFPGWTCISV NNEIAHGVPS ETKILQEGDL VNIDVSAELN GFWSDNGGSF VLGEDIHGHG
KLVSASKRIL SKALGQVKGG VRIADIGRLI ETEAKKSGYK VIKNLAGHGV GRSLHEEPHE
IANYYDRYNT ARFRKNSVVA IETFISTAST SAATERDGWT LVGSRGGYVA QHEHTIIVTD
GKPVILTAMN GIFD