| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1958 |
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| Symbol | |
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| ID | 8225530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2394963 |
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| End bp | 2395604 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644929796 |
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| Product | Haloacid dehalogenase domain protein hydrolase |
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| Protein accession | YP_003086347 |
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| Protein GI | 255035726 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.118058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGATCA GCGATCTCAA AATCCTCTTT TTCGACATTG GCGGCGTTCT GCTCAGCAAC
GGCTGGGGAC ATGAGTCCCG CATCCTGGCG GCGGAAAAGT TTGGCCTCAA TTACAAGGAA
ATGGACCAGC TCCATAACTT CATTTTCAAT GTTTACGAAA TCGGGAGCGT TAACCTCGAC
CAATATCTCG ACACGGTGAT ATTTAACCAC CCGCGCGATT TCGTTCGGGA GGATTTCAAA
GAGTTTATGT ATTCGCAATC CGTGGAGCTG CCCGGAATGC TGGCGTGGCT CAAAGAATGG
AAGAAGGATT GCGGGTTCCG CATTATTTCC ATTAATAATG AAGGGAAGGA ATTGAACGAC
TACCGCGTTC AGAAGTTCAA GCTGCACACT TGTTTCGATG CATTCATTTC ATCGTGCGAA
GTAAAAATGC GCAAGCCCGA TCCAAGGATT TTCGAACTGG CAATGGGCAT TGCGCAGGCA
ACACCCAGCC AGTGCGTGTA TTTCGACGAC CGCATTATGT TTGCCAACAT GGCCAAAACC
CTCGGCCTGC GCGCATTCCA GCACACAAGC TTCGAATCCA CAAAGGCGAT CCTCGAAGAA
CTGAAAAAAG AACAATTCGA CCGCTTCGGC CCACCGCATT GA
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| Protein sequence | MQISDLKILF FDIGGVLLSN GWGHESRILA AEKFGLNYKE MDQLHNFIFN VYEIGSVNLD
QYLDTVIFNH PRDFVREDFK EFMYSQSVEL PGMLAWLKEW KKDCGFRIIS INNEGKELND
YRVQKFKLHT CFDAFISSCE VKMRKPDPRI FELAMGIAQA TPSQCVYFDD RIMFANMAKT
LGLRAFQHTS FESTKAILEE LKKEQFDRFG PPH
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