Gene Dfer_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1943 
Symbol 
ID8225514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2376252 
End bp2376812 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content50% 
IMG OID644929781 
ProductMethyltransferase type 11 
Protein accessionYP_003086333 
Protein GI255035712 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.415083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC AAGAGGCCAT AGAACTAATC GATGGCGGAG CCAATGGCGA GCATGCGCAG 
TACTGGTTAG ATTTGGGTTG TGGGACGGGG ACTTTCACCG AAGCCTTGGC GACGATGCTG
CCAGCGTACA GCAAGATTAT CGGCGTGGAC AAAAACACCC AACAGCTTCC GCCACAAATG
GGCAACCAGG TTTCGATCAA ATTCATCGAG GCCGATTTTG GAACAGAGGC GTTGGAGATG
GCGGGATTAG ACGGGATCCT GATGGCGAAC TCCCTTCATT TCATCAGGGA TAAAGAATCG
TTAATCCGGC GCCTGGAAAA CCTTTTTAGT AAAGGTAGAA GGTTTTTGAT TGTCGAGTAC
GACACAACAG CATCCAATCG CTGGGTGCCA TATCCCATTG ACTTCAAGGG TCTAAAAAGC
CTTTTCGACC GTATCGGGAC TTACACCATA TCAAAACTTG GGGAGCGCAG GTCGTTGTAT
GGTTCCGCGA TGCTCTATGG TGCGCTGATT ACCTCCCCGG CCCAGTCAAT AAGCCCATCT
CAAACCACGT CCCGCAAATA G
 
Protein sequence
MTNQEAIELI DGGANGEHAQ YWLDLGCGTG TFTEALATML PAYSKIIGVD KNTQQLPPQM 
GNQVSIKFIE ADFGTEALEM AGLDGILMAN SLHFIRDKES LIRRLENLFS KGRRFLIVEY
DTTASNRWVP YPIDFKGLKS LFDRIGTYTI SKLGERRSLY GSAMLYGALI TSPAQSISPS
QTTSRK