Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1923 |
Symbol | |
ID | 8225494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2359418 |
End bp | 2359855 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644929766 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_003086318 |
Protein GI | 255035697 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0356258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.456316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTG AAAAAGAAGT TATTTGTCTG GGTCACAGAA TTATACCACA CCAAACAAGC GGAAGTTACG ATCTGATTGA AGGCATATCT GCCCCGGGTG TACCCGGCCC ACCCCCTCAT TATCACAGCA AATACCATGA GGTGTTTGTG GTCACAGAAG GCGCGCTGGA ATTTCTTATT GACGGCAATC CGGTGACGGT AAAAGCAGGG GAAAGTATAG ACATTCCCGC CAATACGCTG CATACCTTCA CCAATCAAGG AGAAAGTAAT TGCCGTTATC TCAATATTCA CAGCCCAAAG GGTTTTCTGG GACTGTTCGA AACTTTCGGT GTTGATGCCT CAGAACAGCA TGCATTTGAA AAGTCAGTCG CACCCGATGT AATCAGTAGG GTACTTCAAA GGGCAACAGA TTTTGATATG CATATTATTG TTAGTTAA
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Protein sequence | MKVEKEVICL GHRIIPHQTS GSYDLIEGIS APGVPGPPPH YHSKYHEVFV VTEGALEFLI DGNPVTVKAG ESIDIPANTL HTFTNQGESN CRYLNIHSPK GFLGLFETFG VDASEQHAFE KSVAPDVISR VLQRATDFDM HIIVS
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