Gene Dfer_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1923 
Symbol 
ID8225494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2359418 
End bp2359855 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content44% 
IMG OID644929766 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003086318 
Protein GI255035697 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0356258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.456316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTG AAAAAGAAGT TATTTGTCTG GGTCACAGAA TTATACCACA CCAAACAAGC 
GGAAGTTACG ATCTGATTGA AGGCATATCT GCCCCGGGTG TACCCGGCCC ACCCCCTCAT
TATCACAGCA AATACCATGA GGTGTTTGTG GTCACAGAAG GCGCGCTGGA ATTTCTTATT
GACGGCAATC CGGTGACGGT AAAAGCAGGG GAAAGTATAG ACATTCCCGC CAATACGCTG
CATACCTTCA CCAATCAAGG AGAAAGTAAT TGCCGTTATC TCAATATTCA CAGCCCAAAG
GGTTTTCTGG GACTGTTCGA AACTTTCGGT GTTGATGCCT CAGAACAGCA TGCATTTGAA
AAGTCAGTCG CACCCGATGT AATCAGTAGG GTACTTCAAA GGGCAACAGA TTTTGATATG
CATATTATTG TTAGTTAA
 
Protein sequence
MKVEKEVICL GHRIIPHQTS GSYDLIEGIS APGVPGPPPH YHSKYHEVFV VTEGALEFLI 
DGNPVTVKAG ESIDIPANTL HTFTNQGESN CRYLNIHSPK GFLGLFETFG VDASEQHAFE
KSVAPDVISR VLQRATDFDM HIIVS