Gene Dfer_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1888 
Symbol 
ID8225459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2324467 
End bp2325555 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content54% 
IMG OID644929735 
Productpeptidase M19 renal dipeptidase 
Protein accessionYP_003086287 
Protein GI255035666 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAC TGATTTTCGA CGCCCACCTG GATTTGTCTA TGAATGCCAT CGAATGGAAC 
CGGGACCTGA CCCGCCCACT GGCTGAAATA CGGCAGCGCG AGATGCATAT GTCCGACAAA
AACGACCGCG GCAAAGGGAC GGTATGTTTA CCGGAGCTTA GAAAGGGCAA TATTGGTTTG
GTAGTAGCAA CCCAGTTGGC GCGCTACACC CCACAGGGAA GTGCGCTGCC GGGCTGGAAT
TCGCCTCAGC AAGCCTGGGC GATGACGCAG GCGCAGCTGG CCTGGTACCG GGAAATGGAG
GCACTTGGCG AAATGGTCCA GATCAGGGAT GTGGCAGGAT TAAATGCACA CCTGACGCTA
TGGAATGATC AGTCCATGGC GGCCGAATCG AAGCCTGTCG GCTATATTTT AAGTCTGGAA
GGGGCCGATT CCCTGGTGGA TATTTCCTAT TTGCAGAGAG CTTATGACGA CGGCCTGCGG
GCAGTTGGGC TGTCGCATTT CGGGTCCGGG AGGTATGCTC CGGGGACAAA GATGCAGGGG
CCGGTGACGC CGGCGGGGTT TGAGTTAATG CGCGAAATGT CCCGGCTGAA TATGATACTT
GATACGACGC ATTTGACGGA CGAAGGCTTT GAGCAGGTAA TGGATATTTA CGACGGGCCT
ATCTGGTCGA GCCACCATAA CGTCCGCAAA ATTGTGCCTA ACCAGCGGCA ACTTACCGAC
CACCAGATTA AAAGGTTGAT CGAGCGGGGC GCTGTGATTG GCGGTATGCT CGATTGCTGG
GCGATGGACA TCCGTTTTAT CGATATGGTT TCCGACCCCT GGCAACTGGA TATCAGGCTG
GAACATTTGG TCGATCACTG GGACCACATC TGCCAGCTGG CGGGAAATAG TCATCACATT
GCCATAGGGA GCGATCTCGA CGGTATTTTT GGCACAGAGC AATCTCCCTG GGACCTCAAT
TCGATTGCAG ACTTACAGAA ATACGAATCC ATTCTCGAAA GAAGAGGCTA CTCGGAAACA
GATATCGACA ATATCTTTAA TGGAAACTGG CTGAGGTTCC TGAGGGAGGC GTGGCGAGCC
AATGAGTGA
 
Protein sequence
MSRLIFDAHL DLSMNAIEWN RDLTRPLAEI RQREMHMSDK NDRGKGTVCL PELRKGNIGL 
VVATQLARYT PQGSALPGWN SPQQAWAMTQ AQLAWYREME ALGEMVQIRD VAGLNAHLTL
WNDQSMAAES KPVGYILSLE GADSLVDISY LQRAYDDGLR AVGLSHFGSG RYAPGTKMQG
PVTPAGFELM REMSRLNMIL DTTHLTDEGF EQVMDIYDGP IWSSHHNVRK IVPNQRQLTD
HQIKRLIERG AVIGGMLDCW AMDIRFIDMV SDPWQLDIRL EHLVDHWDHI CQLAGNSHHI
AIGSDLDGIF GTEQSPWDLN SIADLQKYES ILERRGYSET DIDNIFNGNW LRFLREAWRA
NE