| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1813 |
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| Symbol | |
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| ID | 8225384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2231006 |
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| End bp | 2234128 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929665 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003086217 |
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| Protein GI | 255035596 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.683643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAT TAACACAAAG CATTGTGGGC TTCTCTTTGA AGAACACAAT GATCATCTTT
TTCATGACCG CCCTGCTGGC TGTGGTGGGG ATCGTCAGTT ACATCCATAC GCCCATCGAA
GCATTTCCTG ACGTGACCAA CACCCGGGCC AGGATCATTA CGCAATGGCC GGGCCGGAGC
GCCGAGGAGG TCGAAAAGTT TATTACCCTT CCCGTCATGA AGGAAATGAA CACCATTCCA
CGCAAAGCGC AGGTCCGCTC GATCTCGCTT TTCGGGCTAT CGGTGGTGAC GGTGCTGTTC
GAGGACGGAG TTGAGGATTT TTACGCCCAG CAGTACGCTT CCACGCGCCT CCGCAATGTT
GGCATGCCGT CGGGTGCAGA GGCCGAAATC GAGCCGCCTT ATGGCGCCAC AGGGGAAATA
TTCCGGTATG TGCTCAAAAG CGACCGGCCC ATCAAGGAAT TGACCGCTCT TCAGGAATGG
GTGATCGAGC GTGAGCTGGT GGCCGTGCCC GGCGTGGCTA CGGTGGCGAG CTTTGGCGGC
GAGGAGAAAA TTTATGAAGT GCGCGTCAAC CCGGCGCTGC TGGCGCAGTA CAACCTCACG
CCGCTCGACG TGTTTGATGC CGTCGGCAAG AGCAATATCA ATGTGGGCGG GGATGTGATC
CAGAAAGGCG ATCAGGCTTA TGTGGTGCGC GGAATGGGCC TGCTCGAAAG CGTCAAAGAC
ATTGAGAATA TCCTCATCCA GGTGAAGGGA AATACGCCGG TACTGGTGAA GCAGGTCGCC
GACGTGGAAG TAACCGCCAA GCCGAGGCTG GGGCAGGTAG GATTGGGAGA AGACAAAGAC
CTGGTAGAAG GTATCGTGGT AATGCTCCGG GGCGAGAACC CGAGTGACGT GATCGAGCGC
CTCGAAGCCA CCATTGCCGA TCTCAACAAC CGCATTCTGC CGTCGGACGT ACAGATTGAG
CCGGTGATCG ACCGTACCGA GCTGGTAGAC GCTACCGTGA ACACCGTAAC GCATAACCTT
GCCGAGGGCA TTGTGCTGGT ATCGGTGATT GTATTTGTAT TTTTGTTCAA CTGGCGCACC
ACGTTAACAG TCGCATTGGT GATCCCGCTA TCCTTCCTGT TTGCCATCAC CATGCTGCGC
ATCCAGGGGC TGCCTGCGAA CCTCATCTCC CTGGGCGCGA TCGACTTCGG GCTGCTGCTG
GAAGGGACAA TGGTGATTGT GGAGAAAATA TATGTCGATC TGGAAGGCAG GTCGCGGGTT
TTGGGAGAGG AAAGGTTTGG CAAAATGTCG AAGCTGGGGC TCATGAAGCG GAGTGTTAAG
CACGTGGCAC CGCACATATT TTTTGCCCAG ATTATCCTGA TCGTCGCATT GCTGCCCATT
TTCTCATTCC AGAAAGTGGA GGGTAAAATG TTTGCGCCGC TGGCATTTAC GCTTGGCTAT
GCATTGGTGG GCTCGCTGAT ACTCAGCCTC ACGTTCGTGC CGGCGATGTG CAAGGTGCTG
CTGCGGGGCA AGGTGCGGGA GGTGAACAAC CCGGTGGTGA ATTTTTTCCG GACCAATATT
TTCAAACTAT ACCAATGGAG CGATCGGAAC AAGCGGCTCG TCATGGTCGG CTTTGTGGTG
CTGTTTGCGG TTTGTATCGG CAAATTCCTC CATTACGGCA CCGAATTCAT TCCCAAGCTC
AATGAAGGCG CTATTTATGT GCGCGCCACT TTGCCCAACA GCATTAACCT CGAACAGTCC
GTCAAAACGA GCAATACCCT CCGTGATACC CTGCGCTCGT TTCCCGAAGT GAAGTTCGTC
ATGAGCCAGA CAGGCCGCCC CAACGACGGT ACCGACCCTA CCGGATTTTT TAACAATGAA
TTCCATATCC AGCTCAAACC CGAGAGCGAG TGGAAGCGGA AGATCACCAA GGAGGAGCTG
CTGCGGCAGA TGAAGGATGT ACTGGCGTCG TTTCCCGGCA TTACCTTCGG TTTCAGTCAG
CCCATCCAGG ATAATGTCGA AGAATACGTG GCCGGTGTGA AGAGCTCTCT GGTCGTCAAA
ATCTTCGGCG ACGACCTGGT CGAGCTCGAA CGACAGGCCG ACGATGTGGC CGCGCATCTG
AAAACCGTAA ATGGCATTGC CGACATCCTG GTGTACCGCA ACATTGGCCT GCCCGAGCTC
AACATCAAAC TCGACGAAGG CCGCATGGCC CGGCACGGCG TGTCGATGGC CGACGCCCAG
GCTGTGATCG AGATGACCAT CGGCGGAAAA GCGGCCTCGG TATTCTACGA AAACGACCGG
ATGTTCGATA TCACCGTTCG GTTCCAGGAA AAATACCGAA ATACCCAGGA AGAGATCGGG
AACATTCTCA TTCCGTCCCT GGACGACCAC CAGGTACCGC TGAAAGAGAT CGCCACCATC
GGTACCAAAA CCGGCCCCGC ATTCATTTAC CGCGAAGGCA GCAGCCGCTA CATCGGCATT
GGTTTCAGCA TTGAAGGGCG CGATTTGGGC AGCACCATTG CCGAGGCGCA GCAGGTGGTG
AAAGAGAAGG TCAAAATTCC GAAAAATGCC AAAGTAGAAT GGGCGGGCGA ATTTGAAAGC
AAGGAGCGCG CCACGCAGCA GCTGTCGGTA ATCGTGCCGG CCGCTGTGGT GCTCATCGTC
TTTTTGCTCT ACATGAATTT CGGAAATGCG AAAGACACGC TTATCTCGCT GATTACCATT
CCGTTCGCAT TCATCGGGGG ATTTATCTCG CTGTGGGTCA CGGGTACCAT CTTCGGCATT
TCGGCGGGGA TCGGGTTCAT CATTCTGTTT GGCGTGTGTA CCATCGACGG CATTATTCTC
GTGCACGTCA TGAAGGATAA CCTGCTGCAT AAAATGCCAC TCCGGCAGGC CATTTCCGAC
GGCATTTACG GCCGGATCAG GCCGGTGATC ATGATTGCCC TCATGGGCTC GCTGGGGCTG
CTGCCGGCCG CCCTTTCCAA TGGAATGGGC TCCGAAATCC AGAAGCCGCT CGCGATCATG
ATCGTGGGAG GATTGCTGAT CTGCATGTTT TTGTCATTCA CGGTGTTGCC GCAGATTTTC
TACTGGGCCT ACCGCAAAGC CGATGAGCCG GCCAGCCAAC CGGCGGGGCA CTTAACGGAA
TAA
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| Protein sequence | MQKLTQSIVG FSLKNTMIIF FMTALLAVVG IVSYIHTPIE AFPDVTNTRA RIITQWPGRS
AEEVEKFITL PVMKEMNTIP RKAQVRSISL FGLSVVTVLF EDGVEDFYAQ QYASTRLRNV
GMPSGAEAEI EPPYGATGEI FRYVLKSDRP IKELTALQEW VIERELVAVP GVATVASFGG
EEKIYEVRVN PALLAQYNLT PLDVFDAVGK SNINVGGDVI QKGDQAYVVR GMGLLESVKD
IENILIQVKG NTPVLVKQVA DVEVTAKPRL GQVGLGEDKD LVEGIVVMLR GENPSDVIER
LEATIADLNN RILPSDVQIE PVIDRTELVD ATVNTVTHNL AEGIVLVSVI VFVFLFNWRT
TLTVALVIPL SFLFAITMLR IQGLPANLIS LGAIDFGLLL EGTMVIVEKI YVDLEGRSRV
LGEERFGKMS KLGLMKRSVK HVAPHIFFAQ IILIVALLPI FSFQKVEGKM FAPLAFTLGY
ALVGSLILSL TFVPAMCKVL LRGKVREVNN PVVNFFRTNI FKLYQWSDRN KRLVMVGFVV
LFAVCIGKFL HYGTEFIPKL NEGAIYVRAT LPNSINLEQS VKTSNTLRDT LRSFPEVKFV
MSQTGRPNDG TDPTGFFNNE FHIQLKPESE WKRKITKEEL LRQMKDVLAS FPGITFGFSQ
PIQDNVEEYV AGVKSSLVVK IFGDDLVELE RQADDVAAHL KTVNGIADIL VYRNIGLPEL
NIKLDEGRMA RHGVSMADAQ AVIEMTIGGK AASVFYENDR MFDITVRFQE KYRNTQEEIG
NILIPSLDDH QVPLKEIATI GTKTGPAFIY REGSSRYIGI GFSIEGRDLG STIAEAQQVV
KEKVKIPKNA KVEWAGEFES KERATQQLSV IVPAAVVLIV FLLYMNFGNA KDTLISLITI
PFAFIGGFIS LWVTGTIFGI SAGIGFIILF GVCTIDGIIL VHVMKDNLLH KMPLRQAISD
GIYGRIRPVI MIALMGSLGL LPAALSNGMG SEIQKPLAIM IVGGLLICMF LSFTVLPQIF
YWAYRKADEP ASQPAGHLTE
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