Gene Dfer_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1798 
Symbol 
ID8225369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2210839 
End bp2211465 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content49% 
IMG OID644929650 
ProductSCP-like extracellular 
Protein accessionYP_003086202 
Protein GI255035581 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAGCC TGCATAAAGG CGAATACTAT TCTGTGGATG AGGCCCGCTT TTTTGCAACT 
GCAAAATCCA ATGCATTGAT TACATTGCAG CATCCGGATA CGTTATTTCT GGACGCGGCC
GTCTTTCATG CCAGTAACGA AGTGCGGAGG AAACATGGCT TACCACCATT TGAATATGAT
CCTGGTTTAT ATTTGGCATC TGCCGGTCAC GCGACATCCA TGACCTACCG CATGTTTTTC
AACCATACCA ATCCATATAG TCCTTACGAA CGCACTGCTC AGCAACGCGT CCATCTTTAT
ACGAAGAGAT TCAGGCGGGT GGGCGAGAAC ATCGGCAAAT ACCAGACATT AGTCAGCGGG
ACTTATATGA TCGCGCGGTG GGACGCTTCC AGCAAACAGT ACGAGTTCCT GAATGAAAGC
GATAATAAGC TATGCATTCC ATACACTTAT GCCGACTATG CACGGTTCGT GGTGGAAAAA
TGGATGGCTT CGCCGCCTCA CCGGCAAAAC CTGATGAATC CCGCATACAC TTCCCTTGGC
TGCGCTGCCC GACTGACGCC AGAGCCTTAT CTTCACAAAA AAGCACCCTA CGCAAGCCTG
GTGCAGAACT TCGGAGGTGA GCAATGA
 
Protein sequence
MYSLHKGEYY SVDEARFFAT AKSNALITLQ HPDTLFLDAA VFHASNEVRR KHGLPPFEYD 
PGLYLASAGH ATSMTYRMFF NHTNPYSPYE RTAQQRVHLY TKRFRRVGEN IGKYQTLVSG
TYMIARWDAS SKQYEFLNES DNKLCIPYTY ADYARFVVEK WMASPPHRQN LMNPAYTSLG
CAARLTPEPY LHKKAPYASL VQNFGGEQ