| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1739 |
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| Symbol | |
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| ID | 8225310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2123092 |
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| End bp | 2124531 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929593 |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003086145 |
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| Protein GI | 255035524 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCACG ACGAAGCATT GTCACCAAAC CGGCAGTTAA CAGCGCAGGA AATGGCGGTG
CTTACCTCGC TGTACCGGCA ATTGGCCACT GCCCCTAGCC TGCTGGCATT GCAACAAATC
CTGAACGACC AACTGAAAGC GTTGTTCCAC TTCACCCATT GCCGGATCAG CAGGCTGCCG
CTGTCCGCTG ATGCCCACGT ACCAGCGGGC GAGGCCAGCG AACATGAAGT ACTGGCAATC
GCATTGCACG ACGAATCAGG GACATGGGGC CATTTACGCT TTTATTCCGA CCGCGAAGCC
ATTTCTCCGG CGATACCGAT GGCCTTGCCG GACCAGGTGT CCAGCGTGGT TTCGCTTGCC
ATTGCCAACA TCGTTTCAAC GGAAAAGCTG AGCCGGCAAC TGGAAGAAAT CAAGCATTAC
CAAAGCCAGC TGGAAGAACA GAATGCATAC CTGCTCGAAG AGGCGAAAGA AGGCTTCTCC
TACGACGACA TTATCGGTTC CAGCGGGCCC ATGCAACGTG TTTTTCAGCT TTTGTCGCAG
GTTTCGTTTA CCAACAGCAC CGTGTTACTG CTCGGGGAAA CCGGCACCGG GAAGGAACTG
GTGGCGAGGG CCATCCACAA TTCATCCGCG CGAAAGGACA GGCTGATGGT GCGCGTAAAC
TGCGCCGCCA TTCCGGCCCA CCTGATCGAA AGCGAGCTGT TCGGGCACGA AAAAGGCAGC
TTTACCGGCG CATTTGAACG CCGGATCGGC AAGTTCGAAC TGGCTAATCA GGCCACGCTT
TTCCTGGACG AAATCGGTGA AATGCCGCTG GATATGCAGG CGAAGCTGCT CCGCGCCATT
CAGGAACGGG AAATAGAGCG CATCGGCGGG AAGGGCGTGA TCAAAGTCGA CGTGCGCATT
ATCGCGGCCA CCAACCGGAA CTTGCTGGAA GAAGTACAGC AAGGCCGCTT CCGCAGCGAC
CTTTTTTACA GGCTCCATGT TTTTCCCATT ACACTCCCGC CCCTGCGGGA ACGAACCGGG
GATATTTCCC TGCTGGCCAA ACAGTTCGTC GGCAGGTTTG CCAAAAACAA CGGAAAAAGC
ATTTCGCGGA TATCCAGCAA TGTGATGAAG GCGCTGCTGG CCTATCCCTG GCCCGGCAAT
GTGCGCGAGC TCGAACACCA GATGGAACGC TGTGTGCTGC TCGCCCGCGA CCACGTGATC
CGCGACGTGC TGCTGCCTTC TCCCACCCAG TCCGGGCACG CACCTGCCGC AGGCATTTAC
ACCAAAACGC ACGAGGAAAA CGAGCGCGAA TACATTATCC GGGTTCTCAA TCAATGCAAT
GGAAAAATAT ACGGCCCCGG AGGCGCCGCC CAGCTGCTCA ACCTGAAAGT GGGAACATTG
AATTCCAAAA TCAAAAAGCT CGGCATCAGC AAGGAGCAGA TCATTCTGAG AAACCACTGA
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| Protein sequence | MSHDEALSPN RQLTAQEMAV LTSLYRQLAT APSLLALQQI LNDQLKALFH FTHCRISRLP
LSADAHVPAG EASEHEVLAI ALHDESGTWG HLRFYSDREA ISPAIPMALP DQVSSVVSLA
IANIVSTEKL SRQLEEIKHY QSQLEEQNAY LLEEAKEGFS YDDIIGSSGP MQRVFQLLSQ
VSFTNSTVLL LGETGTGKEL VARAIHNSSA RKDRLMVRVN CAAIPAHLIE SELFGHEKGS
FTGAFERRIG KFELANQATL FLDEIGEMPL DMQAKLLRAI QEREIERIGG KGVIKVDVRI
IAATNRNLLE EVQQGRFRSD LFYRLHVFPI TLPPLRERTG DISLLAKQFV GRFAKNNGKS
ISRISSNVMK ALLAYPWPGN VRELEHQMER CVLLARDHVI RDVLLPSPTQ SGHAPAAGIY
TKTHEENERE YIIRVLNQCN GKIYGPGGAA QLLNLKVGTL NSKIKKLGIS KEQIILRNH
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