Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1691 |
Symbol | |
ID | 8225262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2058792 |
End bp | 2060078 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644929545 |
Product | hypothetical protein |
Protein accession | YP_003086097 |
Protein GI | 255035476 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.06847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0302884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAGA CGCCAACACC TTTTCCCGAA TTGTACAGCG AAGAGATACA GGAGATCATT AATCGACCAC CCGGTTGGCT GCTACGCTCT GGGATGTCTC TTTTCTTTGC GGTACTAAGC ATATTTTTTG CGAGTTGCTG GATGATTAAA TATCCAGATG TTATCCCTGC GACATTTACG TTGGTTGCAG ACAATATACC TCGATCAGTT ATTATCAGGT CAGACGGAAA ACTGCAACGA ATTCTTGTAA GAGATGGACA GTATGTAAAT CAACGGCAAA TGGTGGCCTT TATGGAGAGC ACTGCCAGCC ATGACCAGAT AAATCTGCTC GAAAAGAATA TTCAACTATT GGCCACATAC ATTGAGCAAG GTCAGTGGGA AAACGTCAAT GGGTTTTCGA CAGACTCTTA TAACATGCTT GGTGAGATTC AAGGCGATTT TCAGGCATTT GCTCAGAACT TTGTCAGGTT AAAGACATTT CTCAACAGCG GATACTGTAT CCAAAAGCGA AGTCTGTTGC GAAACGAATT AGCCGATTTT AAAGATTTGG AACAAAATAT TATCGAACAG TTGCAACTAC AAAGGCAAGA TTTAATACTG GGGAAAGATG AGTTCAAAGT TCAGGAAAGA TTATTTGGCG ACAGAGTCAT TTCTTCGTTG GAATACAAAA AGGAGAAATC AAAACTACTA GCGCGTGAAA TGCCGGTCAA AAGTTTAACA GCTTCTTTGA TCCAAAACCG TTCATCGCAA ACTGCCAAGC GGAAAGAAAT ATTAGAACTT GACAATGCCA TTGCTGAGAG TAAAGCTAAT TTTCGTCAAG AGCTTCAAAC ATTGCAGAGT AGTATCGAAT TATGGAAACA GCGATATGTA GTTCTCGCGC CAGTGGCTGG GACGGTATCA TTTGCGGCAC CTTGGCAGGA GCAGCAGCAC GTAGCTGTTG ATTGGGAATT GTTGACGGTA GAACCTCCTC AAAGTGGTTT TCGAGGATTG GTGAAATTAT CGCAGGGAAG TCTGGGTAAG GTTAAAGAAG GGCAGAAGGT CCTAGTCAAA TTAGATGGAT ATCCTCATCA GGAATTTGGG TCGATTGAAG GAATTTTATC AAAAATTTCA ACAACGCCTG GACGCGATTC TTCATATTGG GGTTATGTAG CCCTTCCACA TCAGCTCGAA ACGAAATATG GTCGAAAACT GACATACAGA AGCGGACTTA GCGGTACCGC CGAAGTTGTG ACTACGGATA GAAGATTGAT AGCCAGGCTT ATTTCCACGA TTAGAGATGG AGGATAG
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Protein sequence | MSKTPTPFPE LYSEEIQEII NRPPGWLLRS GMSLFFAVLS IFFASCWMIK YPDVIPATFT LVADNIPRSV IIRSDGKLQR ILVRDGQYVN QRQMVAFMES TASHDQINLL EKNIQLLATY IEQGQWENVN GFSTDSYNML GEIQGDFQAF AQNFVRLKTF LNSGYCIQKR SLLRNELADF KDLEQNIIEQ LQLQRQDLIL GKDEFKVQER LFGDRVISSL EYKKEKSKLL AREMPVKSLT ASLIQNRSSQ TAKRKEILEL DNAIAESKAN FRQELQTLQS SIELWKQRYV VLAPVAGTVS FAAPWQEQQH VAVDWELLTV EPPQSGFRGL VKLSQGSLGK VKEGQKVLVK LDGYPHQEFG SIEGILSKIS TTPGRDSSYW GYVALPHQLE TKYGRKLTYR SGLSGTAEVV TTDRRLIARL ISTIRDGG
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