Gene Dfer_1691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1691 
Symbol 
ID8225262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2058792 
End bp2060078 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content42% 
IMG OID644929545 
Producthypothetical protein 
Protein accessionYP_003086097 
Protein GI255035476 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.06847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0302884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGA CGCCAACACC TTTTCCCGAA TTGTACAGCG AAGAGATACA GGAGATCATT 
AATCGACCAC CCGGTTGGCT GCTACGCTCT GGGATGTCTC TTTTCTTTGC GGTACTAAGC
ATATTTTTTG CGAGTTGCTG GATGATTAAA TATCCAGATG TTATCCCTGC GACATTTACG
TTGGTTGCAG ACAATATACC TCGATCAGTT ATTATCAGGT CAGACGGAAA ACTGCAACGA
ATTCTTGTAA GAGATGGACA GTATGTAAAT CAACGGCAAA TGGTGGCCTT TATGGAGAGC
ACTGCCAGCC ATGACCAGAT AAATCTGCTC GAAAAGAATA TTCAACTATT GGCCACATAC
ATTGAGCAAG GTCAGTGGGA AAACGTCAAT GGGTTTTCGA CAGACTCTTA TAACATGCTT
GGTGAGATTC AAGGCGATTT TCAGGCATTT GCTCAGAACT TTGTCAGGTT AAAGACATTT
CTCAACAGCG GATACTGTAT CCAAAAGCGA AGTCTGTTGC GAAACGAATT AGCCGATTTT
AAAGATTTGG AACAAAATAT TATCGAACAG TTGCAACTAC AAAGGCAAGA TTTAATACTG
GGGAAAGATG AGTTCAAAGT TCAGGAAAGA TTATTTGGCG ACAGAGTCAT TTCTTCGTTG
GAATACAAAA AGGAGAAATC AAAACTACTA GCGCGTGAAA TGCCGGTCAA AAGTTTAACA
GCTTCTTTGA TCCAAAACCG TTCATCGCAA ACTGCCAAGC GGAAAGAAAT ATTAGAACTT
GACAATGCCA TTGCTGAGAG TAAAGCTAAT TTTCGTCAAG AGCTTCAAAC ATTGCAGAGT
AGTATCGAAT TATGGAAACA GCGATATGTA GTTCTCGCGC CAGTGGCTGG GACGGTATCA
TTTGCGGCAC CTTGGCAGGA GCAGCAGCAC GTAGCTGTTG ATTGGGAATT GTTGACGGTA
GAACCTCCTC AAAGTGGTTT TCGAGGATTG GTGAAATTAT CGCAGGGAAG TCTGGGTAAG
GTTAAAGAAG GGCAGAAGGT CCTAGTCAAA TTAGATGGAT ATCCTCATCA GGAATTTGGG
TCGATTGAAG GAATTTTATC AAAAATTTCA ACAACGCCTG GACGCGATTC TTCATATTGG
GGTTATGTAG CCCTTCCACA TCAGCTCGAA ACGAAATATG GTCGAAAACT GACATACAGA
AGCGGACTTA GCGGTACCGC CGAAGTTGTG ACTACGGATA GAAGATTGAT AGCCAGGCTT
ATTTCCACGA TTAGAGATGG AGGATAG
 
Protein sequence
MSKTPTPFPE LYSEEIQEII NRPPGWLLRS GMSLFFAVLS IFFASCWMIK YPDVIPATFT 
LVADNIPRSV IIRSDGKLQR ILVRDGQYVN QRQMVAFMES TASHDQINLL EKNIQLLATY
IEQGQWENVN GFSTDSYNML GEIQGDFQAF AQNFVRLKTF LNSGYCIQKR SLLRNELADF
KDLEQNIIEQ LQLQRQDLIL GKDEFKVQER LFGDRVISSL EYKKEKSKLL AREMPVKSLT
ASLIQNRSSQ TAKRKEILEL DNAIAESKAN FRQELQTLQS SIELWKQRYV VLAPVAGTVS
FAAPWQEQQH VAVDWELLTV EPPQSGFRGL VKLSQGSLGK VKEGQKVLVK LDGYPHQEFG
SIEGILSKIS TTPGRDSSYW GYVALPHQLE TKYGRKLTYR SGLSGTAEVV TTDRRLIARL
ISTIRDGG