| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1683 |
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| Symbol | |
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| ID | 8225254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2043921 |
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| End bp | 2047058 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929538 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086090 |
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| Protein GI | 255035469 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.125257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGCT GCACTGCCGC CTTCGCACAG CCCGTTTCCG GGACTGTGCT GGACGAATCG
GGCTCCGGCC TGCCGGGCGT CAGCGTCGTC GTGAAAGGGA CGGCAAACGG TACTACCACC
GACACAAAAG GTAAATTCCA GCTCGATGTG CCGGGCGACA ACCCGACATT GGTTTTCAGC
TTCGTAGGGT ACGCAACGCA GGAAATCGCG GTCAGTAAAC GTACAAGCAT TACCGTTAAC
ATGGCGGTCG AGGATCGGCT CATGACCGAA GTGGTGGTGG TCGGCTACGG AACGCAGCAA
AAGGTGAACG TAACCGGCGC CGTGGGCGTG GCCGATGCCA AACGCATCGA AAACCGCCCC
ATTGCCAACA CCGGCGAGGG CCTGCAAGGC GTGATTCCCA ACCTGAACAT CACCGTGCGC
AATGGCGACC CGGCCCAGTC GCCCAGCTTC AACATCCGGG GCTATGAGTC GATCAACGGC
GGCGCGCCGC TGATTCTCGT CGATAACGTG CCGATGGACA TTAACCGCAT CAATCCCAAC
GACATCGAGA GCATCAGCGT GCTCAAAGAC GCCTCCGCAG CGGCCATTTA CGGCGCCCGC
GCGGCATTCG GCGTGGTGCT CGTGACGACC AAAAGCGGCA AGGCGGGCAA AGTACAGGTG
AATTTCGGCA CCCAGTTTTC GTTGGCCAAA CCCATTTTCA ATATGGATGT CGTCACCGAT
CCCTACCAGT TTGTGCAGGC GCGCAATGCA GCCAACATCC GCACGCTGGG CGCTCCGAGC
TACAACGACC AGTTTGTGGC AGCCGTGAAA AAATACTCCG AAAACCCCAT TCCCGAAAAC
GAATGGGGCG TGGTAGACGG GGCATTGCAG TATTACGGCT ACAACCGCTA CCAGGAAAAA
ATCATGACCA ATTACGCGCC TACCAACCAG CAGGACCTGT CGATTTCGGG CGGTGGCGAT
AAGTCGAAAT TCTTCTTTTC ATTCGGGCGG TACAGCAAGG ATGGCTACCT GCGCTATAAC
AATGAGAAGT TTAAGCGCTA CAACATTCTG ATGAAAGCGG ATTTTCAGGT CAACAAATGG
CTCAGTTTGT CGGAAAAAGT GGTTTTCAAT TCCCAAAACA GCGACAAGCC GCACTTCTAT
AACTGGGACG TGAACATCAA TTCACTCGCG AGGGTGAACC CGTTGCAGGC CATTCAGTTT
CCGGACCTTC CGCAGTACAT GGCGCCCGGC GACCACGATA AATATGCGCC GCTGATCGGT
AAGTATTTCG GCGGGACCAA CTTTTTCCCC TACCTGCTCG ACGGCGGCCG CGAAACATTC
ACCAAAAACG ACCTTTGGCT GTCGCAGGAA GCCGTACTCA CGCCCCTCCC CGGCTTGAAG
ATCACGGGTA ATTTCTCGTA CAACATCTAC AACAATATGT ACCAGGATGT CCAGAGCAAG
GTGGAGATCG TGTCGCAGGA CCTGAAAGAG GCGAATCCGA TCAGCTACGG TTTCAGCGGC
GACGACTGGA TCAAGAATAT GAATGAATAC AACCGGTATT ATGTGCTCAA CACATTTGCC
GAATATACAT TCCAAAACCT GGGGAAACAT CAGCTGATGG CGCTGATTGG CTACAACCAG
GAAATGGGTA ATTACCAATC GTCCACGGCA CAGGCCCGCT CGCTCATTAC CCCGCAGGTG
CCCGACCTGA GCACCACCAC CGGCACGCAG CAGACTCTGG GCGGCAGGTC GCAGGTGGCG
CTGCGCGGCG TGTTTTACCG GCTAGCCTAC AACTACGGCG ACCGCTACCT GCTTGAATTC
AACGGCCGGT ACGACGGCAC ATCGCGCTTT CCGAAAAACG ACCGGTTCGG GTTTTTCCCG
TCCTTCTCGG CCGGCTGGCG GATCAGCAAC GAGAAATTCA TGACCGGTAC CAACAGCTGG
CTCGATAACC TCAAACTGAG AGGCTCTTTC GGAACGCTTG GCAACCAGAT CATCCAGAAC
CGGAGCACGG GGGCGCAAAT CTACTATCCG TCCGTATCCA CAATGGGATC AGGACAAGCT
CCTTACATTT TTGCAGGCTC GCTTATCCCG TTCGTTTCGG CCGCCGGCCT CGTGAGCCCG
ACGCTCACCT GGGAGTCGGT CACGTCCAAA AACCTCGGTC TGGACCTGAC GATTTTAAGA
AGCCGCCTGG ATATGTCGTT CGACATTTAC ACCCGCGACA CCAAGAAAAT GCTCATGAAC
GTGGCCTACC CCGACATTCT CGGAACTACC GCTCCGCAGG AAAACGCGGC CGATCTCCGC
ACGAAAGGCT GGGAACTTTC GCTGACCTGG CGCGACAAAT TCAAATCCGA CTGGACCTAC
GACGTCACCC TCGCCCTGTC CGACGCCAGC GCCACCATTA CCAAATTCCG CAACCCTTCC
GGCGCATTGC CCAACGAAGG CAGCGGGATT TACTACGAAG GCCAGAAACT GGGCGAGATT
TGGGGATACC AAACGGTAGG CATATTTCAG TCGGCCGACG ATGTGGCGGC GGCCCCCAAC
CAGTCGCGCC TCGGCAACAA CTGGCGGGCG GGTGACATCC AGTATGCCGA CCTGAACGGC
GACGGCATTA TCAGCTCCGG CAACAACACG CTTGGAAACC CCGGCGACTA CAAGATCATC
GGAAACTCGT CGCCGCGCTA CACCTACGGC ATCAATGCGA GCATCGGCTA CAAGGGCTTG
CGCCTGACCG CATTCTTCCA GGGCATCGGC AAAGCGGATT ACCTGCCCAA CAACGGCAAC
TGGAACTGGT TTTATCCTTT CAATGCGGGC CACGTAGAGA AGTACTACAT CACCGACACG
TGGTCTGAAA CCAACCGTGA CGCCTATTTC GCGGCACCGC ATATATCCAC GAGCGATAAA
AAGAACATCC TGCCGCAATC CAGATATGTG CAAAATGCCT CGTACCTGCG TGCGAAGAAC
ATCATGCTCA GCTACACATT GCCCTACGAC CTCACGGGCC GGATCGGCAT ATCGCGGGCG
CAGGTATTCG TGTCGGGGAT GAATTTGTTT GAATTCACCA AAATCCGCAA ACCGCTCGAT
CCTGAAACGA TCCGGACGCC GACGATCGAA TACCCCATGC AGCGCATCGG AACGATCGGT
ATCAATATAT CCTTTTAA
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| Protein sequence | MACCTAAFAQ PVSGTVLDES GSGLPGVSVV VKGTANGTTT DTKGKFQLDV PGDNPTLVFS
FVGYATQEIA VSKRTSITVN MAVEDRLMTE VVVVGYGTQQ KVNVTGAVGV ADAKRIENRP
IANTGEGLQG VIPNLNITVR NGDPAQSPSF NIRGYESING GAPLILVDNV PMDINRINPN
DIESISVLKD ASAAAIYGAR AAFGVVLVTT KSGKAGKVQV NFGTQFSLAK PIFNMDVVTD
PYQFVQARNA ANIRTLGAPS YNDQFVAAVK KYSENPIPEN EWGVVDGALQ YYGYNRYQEK
IMTNYAPTNQ QDLSISGGGD KSKFFFSFGR YSKDGYLRYN NEKFKRYNIL MKADFQVNKW
LSLSEKVVFN SQNSDKPHFY NWDVNINSLA RVNPLQAIQF PDLPQYMAPG DHDKYAPLIG
KYFGGTNFFP YLLDGGRETF TKNDLWLSQE AVLTPLPGLK ITGNFSYNIY NNMYQDVQSK
VEIVSQDLKE ANPISYGFSG DDWIKNMNEY NRYYVLNTFA EYTFQNLGKH QLMALIGYNQ
EMGNYQSSTA QARSLITPQV PDLSTTTGTQ QTLGGRSQVA LRGVFYRLAY NYGDRYLLEF
NGRYDGTSRF PKNDRFGFFP SFSAGWRISN EKFMTGTNSW LDNLKLRGSF GTLGNQIIQN
RSTGAQIYYP SVSTMGSGQA PYIFAGSLIP FVSAAGLVSP TLTWESVTSK NLGLDLTILR
SRLDMSFDIY TRDTKKMLMN VAYPDILGTT APQENAADLR TKGWELSLTW RDKFKSDWTY
DVTLALSDAS ATITKFRNPS GALPNEGSGI YYEGQKLGEI WGYQTVGIFQ SADDVAAAPN
QSRLGNNWRA GDIQYADLNG DGIISSGNNT LGNPGDYKII GNSSPRYTYG INASIGYKGL
RLTAFFQGIG KADYLPNNGN WNWFYPFNAG HVEKYYITDT WSETNRDAYF AAPHISTSDK
KNILPQSRYV QNASYLRAKN IMLSYTLPYD LTGRIGISRA QVFVSGMNLF EFTKIRKPLD
PETIRTPTIE YPMQRIGTIG INISF
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