Gene Dfer_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1676 
Symbol 
ID8225247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2039397 
End bp2039807 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content52% 
IMG OID644929531 
Productresponse regulator receiver protein 
Protein accessionYP_003086083 
Protein GI255035462 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.11261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTAA CCGGACCTAT CGTATTGGTG GAGGACGACG AGGACGATAT CTTCCTGATC 
ACGACCGCAT TGGACGAATT GCGCCTCGAA AATTCGGTGA AAGTATTCCG TAACGGCCAC
GACGCGCTCG ATTATCTGCA GGAAACCAAC CCTACACCCG TCGTCATCAT CAGCGACGTC
AATATGCCGG TCATGAACGG TTTCGAATTA CTCGACGCGT TACTTACGCA CCGCGGTTTG
GGGAATACCC TACCCCCGTT CGTGTTCCTC ACTACTTCCG ACCCATCGGC CTTCCAATCG
GCCGGTATGG ACAGCGACCG CATTGCCGTG TTCACGAAGG GATATTCGTA CAAAGAAATC
TCCGAAACGC TTCTGTCCAT TCTTGAATAC AGCAAGTCGG GCTTGAAGTG A
 
Protein sequence
MNVTGPIVLV EDDEDDIFLI TTALDELRLE NSVKVFRNGH DALDYLQETN PTPVVIISDV 
NMPVMNGFEL LDALLTHRGL GNTLPPFVFL TTSDPSAFQS AGMDSDRIAV FTKGYSYKEI
SETLLSILEY SKSGLK