Gene Dfer_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1639 
Symbol 
ID8225210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1986465 
End bp1988717 
Gene Length2253 bp 
Protein Length750 aa 
Translation table11 
GC content56% 
IMG OID644929494 
Producthypothetical protein 
Protein accessionYP_003086046 
Protein GI255035425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.667297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.273253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ACCTATTACC CATTCTCTTT TTGCTCCCGC TGAGCTCCTG CAAGGAGTTC 
CTGGAAGAAA AAATGGTGTC GACCATCACG CAGGACTATT TCGAAACCGA AAAAGGCGCG
GAAGAACTCG TGGTGGCTTC CTACAATACG CTCCGGTGGA AATACGGCTT CATGGAAGGC
CCGTACCTGT TCGAAACCGG CACCGACATT ACCGAACCGA CGGACAACAA CTGGGCGACG
ATCAGCCCTG CCGTATGGGC GCCTACGGGC GAGGCGGGCA ACTATGCCAA TAACCTCATG
GGCTACTACG CCACGCAGCT GCTGGGAAGC TACCCGATCA TCAATGATTG CAATAAGGCC
ATCGAAATCA TTACCGGAAA AGCGCCGGGC AAGTTCGGTT CGGACAAGGC CTATGCCAAC
CAGCGGTTGT CGGAAGTGTA TTTCCTGCGC TCCTGGACGT TTTATATGCT GGTAACGCAG
CTCGGCGACG TGCCGATGCC TTTGAAGAGC AACAACTCGC TGCCGACGGC ATTCAATTTC
CCGAAATCGA CTTCGGCGGA GGTGTACAGC CGCATTATTT CCGACCTGCG TTTTGCACAC
GGACATTTGC CGGTGCGCCA GGGCGAACGC GGCCGCATTA CGAAAGGCGC CGTGTCGCAT
TTGCTTGCAA AATTGTATTT GCAGCGCGCA CAGGGCAGGG AATTCAAGCA ATACCGCGCT
GCGGACGGCA CCGTCAATCC GGGCGATGCC CATGCGCACT TGGGATTGCT GTACAAGGGC
GAAGTCGCCA GCGACCTCGA TTCGGCCCGG ATTTTTGCCA CCGAGGTAAT CGATACTTAC
GGCGCAAGTA ATGGCGGGCA GTTCGGCGGG CTTGCGGATA ATTACTGGGA TTTATTCAAA
ACCGCGCGCG GAGATTGGAG CAATGAAAGC AACCCGGAAA TCATCCTGCA AGCTTCCTAC
GGCAACAACC TCGACAATGG CCGCTACGGC ATGCGTACCA CAGCTGCATT CACCTGCGAT
TATACCAATG CAGCCTGGAA CATTCCTTCC AAAACCTGGG CATACGGCCT CCGCAAAGGC
ACGGGCTTCC TCCCGACCGA CTGGGGTTAC GATGTTTTTA CGGATAAGAT CAATGACTCT
CGCTTCGAAA AAAGCTTCCA GATCGAGTAC GTGAGCGCGT CGTTCGACAA TGCGGCCTTG
CAGGACGGCC CGGGGCTGAC CTACACCGAT GCTGGCAACA AGTCGCTCAC CTGGACGGCG
GATGAGGCAG GTTATTTCAA TGCGAACATT CAGAACAGCT ACAAACGTCC GTCGTGGGGC
GGGCGGAAAG CCGTGGCTGG CGAGCGGAAA ATAGGGCAGG GCGACCTGGG CCTCGTATTT
TTGGAAAATA CCAAAGAAAC GGCGATCGAT GTTAACGAAG CATTGGCGCA GCCTTACGTG
CTGTACCCCC GCTGGGTGAA AAAGGGAAAT GAATATTACT ACCGCAAAAC AGGGGTGGAC
AGGCTGTCGT CCAACACGGG CTTGCTCCTT GGCCGTACCT TGCGTCCATC GTCCCGCAAA
TTCATCGATC CCAACCGCAG CACGGTGGAC AACCACTTCG GCACGCGCGA CGTGGCGATC
TTCCGCCTCG CCGAAACTTA CCTGATCCGC GCCGAAGTGC TGGGTCGCCA GGGTAACTAT
GCCGGCGCGA TCGCGGATAT CAATGTACTT CGCGCACGGG CCGCGTACAA ATCGGGCGAG
AGCCGTGCGG AGGTGCTTGC GCGCCTGTAT CCGGGCTCCG AAAGCCTTAC AGCGTCGGAA
AAAAGCTATC CCTACGCCGC GGCGACCGAT ACTTATGCCA AAATCAGGGT GGACGCTTCC
TATTGGGACG GGGCTTCGAC CAAATCTAAA CTGGAAAATT ATCCGCCCGA GGCGAATACT
TCCGCCAGGC GCTTCATTCA TTTTATATAC AATGAATACT CGCGCGAATT CAACTCCGAG
CAGATCGTGT ACGAGGGCAT TCACCACGCC GGCATCCAGC TCGAACGCGT GCTGCACCAT
AACCAGCTCG CATCTTCCCG CGCAGGCAAC TGGCCCGTGG CCGACAACCC CGTGGCCGCC
AACGGCCAGA ATGGCAATGG AAAAGGTGTT TTTAGTGCAA AAGATACATT CAAGCCGTTC
CCGCAGTCGT ACATGGACAT GCTGACGGAC GAAAAAGGCG CGCCGCTGGG AACGGATGCG
ATCCGGAAAT ACCAGAATCC AGGTTATAAC TGA
 
Protein sequence
MKKYLLPILF LLPLSSCKEF LEEKMVSTIT QDYFETEKGA EELVVASYNT LRWKYGFMEG 
PYLFETGTDI TEPTDNNWAT ISPAVWAPTG EAGNYANNLM GYYATQLLGS YPIINDCNKA
IEIITGKAPG KFGSDKAYAN QRLSEVYFLR SWTFYMLVTQ LGDVPMPLKS NNSLPTAFNF
PKSTSAEVYS RIISDLRFAH GHLPVRQGER GRITKGAVSH LLAKLYLQRA QGREFKQYRA
ADGTVNPGDA HAHLGLLYKG EVASDLDSAR IFATEVIDTY GASNGGQFGG LADNYWDLFK
TARGDWSNES NPEIILQASY GNNLDNGRYG MRTTAAFTCD YTNAAWNIPS KTWAYGLRKG
TGFLPTDWGY DVFTDKINDS RFEKSFQIEY VSASFDNAAL QDGPGLTYTD AGNKSLTWTA
DEAGYFNANI QNSYKRPSWG GRKAVAGERK IGQGDLGLVF LENTKETAID VNEALAQPYV
LYPRWVKKGN EYYYRKTGVD RLSSNTGLLL GRTLRPSSRK FIDPNRSTVD NHFGTRDVAI
FRLAETYLIR AEVLGRQGNY AGAIADINVL RARAAYKSGE SRAEVLARLY PGSESLTASE
KSYPYAAATD TYAKIRVDAS YWDGASTKSK LENYPPEANT SARRFIHFIY NEYSREFNSE
QIVYEGIHHA GIQLERVLHH NQLASSRAGN WPVADNPVAA NGQNGNGKGV FSAKDTFKPF
PQSYMDMLTD EKGAPLGTDA IRKYQNPGYN