Gene Dfer_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1613 
Symbol 
ID8225184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1952749 
End bp1953591 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content55% 
IMG OID644929469 
ProductKelch repeat-containing protein 
Protein accessionYP_003086021 
Protein GI255035400 
COG category[S] Function unknown 
COG ID[COG3055] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.999489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAA ATGGCGAACT GTCCGGCGGA GGTCGCTTCG ATGCCGTCGG CTTTTCCGTT 
GGCAACACCG GCTACATTTC GAACGGTACC GGGTATGACC GTTACCTGCG CGACAACTGG
GCTTTTGACC CGCAAAAAAA CAGTTGGAAC CGCGTTGCGG ATTTCCCCGA AGGCGCGCGC
AGGGAAGCAT TCAGTTTTTC TATCGGCAAC AAGGCCTACG TGGGATATGG CACCAACACC
GACACGTTTT CCCTCCGCAA CGATTTCTAT GAATTCGACC CGGCTACCGG CCGCTGGACG
CGAAAAGCGG ATATCCCGAG GCTGTGGAAC AACAACGCCG TGGGGCTTGC GGTGAACGGC
AAAGGCTATA TCATCACAGG CGATTACTCG AAGCAGGTCC TGGAATACGA TCCGGTAACC
AATCAATGGA CGGTTAAAAA GGATTTTCCG GGTGAAGACA GATCCTCGGC GGCGGGTTTT
GTGATCAATG GGATAGGCTA TCTCGTGGGG GGAAATCCCG GCTACGGGCG TGGGCTGGTG
GACGTGTGGG AATACGACGC TTCGCAGGAC AGCTGGACTC GAAGGGCCGA TATCAGGTCG
ATAGGCTACG AAGGGACCGG GTTTTCGGTT CATGGGAAGG GCTATATCTG CAATGCCAAC
GGTTCTTACA AGCAAATCTT TGAATTCGAC CCTGCGAAAA ATAAATGGTC GAGAAAGAAA
GACTTCCCCG GCGCGGCCAC CACCAGTTCC GTTTCTTTTG TGATCGATGG CGTGGCTTAT
GTAGCCACGG GCTCCACGTA TGGCAACGTT TCCAACGAAA TCTGGCGGTT CGACCCTGAA
TAA
 
Protein sequence
MDQNGELSGG GRFDAVGFSV GNTGYISNGT GYDRYLRDNW AFDPQKNSWN RVADFPEGAR 
REAFSFSIGN KAYVGYGTNT DTFSLRNDFY EFDPATGRWT RKADIPRLWN NNAVGLAVNG
KGYIITGDYS KQVLEYDPVT NQWTVKKDFP GEDRSSAAGF VINGIGYLVG GNPGYGRGLV
DVWEYDASQD SWTRRADIRS IGYEGTGFSV HGKGYICNAN GSYKQIFEFD PAKNKWSRKK
DFPGAATTSS VSFVIDGVAY VATGSTYGNV SNEIWRFDPE