| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1580 |
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| Symbol | |
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| ID | 8225151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1895887 |
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| End bp | 1897692 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644929436 |
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| Product | hypothetical protein |
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| Protein accession | YP_003085988 |
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| Protein GI | 255035367 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000412506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.738361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACG TTACCAGGCT TTCTCCCTTC GGGGTTTGCT GCTTTGTAAT CGTTGCAGCA
TTATGGCTTC CGGTCGCAGT TTTATACGCG CAGCCCGCAG CCAGCCCCCT CTGCTCTTCT
ACGCAACATC ATCAGAAACT GGCTATTTCG AAATCCCAAA AGCAGATTTT TGACGACGCA
CAACAAAGGC TCAATGCCTG GATCGCCGCC CACCACACGA GCCGGGCCGA TGCCGTAGAA
CCGGTGTACA CCATTCCGGT AGTGGTGCAT ATCCTGGAAC CGATCGGGAG TTCGCTCCTT
ACCGACGCCC AGGTGCATGA AGGTATCGCC GAACTCAACA AGGCGTTCAG GAACCAGCTT
GCCGAATCAG ATGGGACGGA TACACGCATT CAGTTCAGGC TGGCCGTTCG CTCGCCGCGA
TGCACGCCTA CCACGGGGAT CAACAGGATT TATACCAACA ATGCAGCCTA CACGTCGTAC
GGGGTCACTG GCCCTGGCGG CGCGGGACTT CCCTATGATC AGGTGTATCC GATGAGTTAT
TGGAATAATC TCGAATATTA CAACGTGTGG GTGGTCAATT ACATGGACCA GGCTGCCGGA
ATGGCCGGTT ACCCCACCGG GAGCGCTTCG CCCACGGACG GCGTGCTGAT CATTGCACCC
TATTTTACTA CCAAACTCCT CGCGCACGAA TTCGGGCACG GGATGTTTCT TGGTCACACG
TTTTCGCGGG GCATCGGCGA GGGGGACCTT GGGACGGTTG AATGCCCGCT CAATGATAAT
TGCGCCGCGC AGGGCGACAA TGTCTGCGAT ACGGAGCCCG TTAACCAAAG CTCCAACTAC
CTTTGCCCCG GCAATCCCAA CCCGCTCAAC CCGTGCAACA ACAACGCGCC GTATGGCAAC
GTCCTGAAAA ATTACATGGG TTACAACAAT TTCAGCTGCC AGACGCAGTT CACGTACGAC
CAGCGCGTCC GCATGCGCGG CGCGATCGAA ACGCTGCGGT CGGGGCTGAT CAACAGCAAA
GGGCTGGACC CCGCCGTGAT CGCGCAAAGC ATCCCGACCG GCACCGCGGC CACGCTTACC
GCCACCGGCT GCAACGGACA GATCCAATGG TACGATGCCA CTTCCGGCGG CAATCACCTG
GGCTCGGGCA GCAGCTACAC CACGCCCGTT CTGGAAGAAT CCAAAACCTA CTATGCATCC
TGCCTCCGCG CCGACTGCCC CAGCGATGTG CGGGTAGCGG GCCTCGTGAC CGTCGGCCCG
GGTTTGCCGG TTACGCTCGT GGCATTCGGG GCAAGTATTT GGGAAGAAAA TCAGGTGCTG
CTGAGCTGGG CCACGTCGTT GGAGGTCATG CACGATCATT TCGAGATCGA ATCGGCCCGG
GATGCGAAAA CGTTCCGAAA GATCGGCCAG GTTTCTGCAC CATTCCGGCT GGCTTCGGGC
GTTTCGGAAT ATCGGTTTAC GGATACGCCG GAGCCGCCTG CCAGCCTTGT GTATTATCGG
TTAAAACAGG TGGACCAGGC CGGGGACGGT ACGGCCGGCC GCTACGCCTA TTCACGGATC
GTGCACGTGC GAATGCCCGA CACGCATGGG ATCACGATCA GCCCCAATCC GGCGGAGCAA
CGCATCCATG TCGACGGTGT TTCCCAAAAC TGGGACGTTG AAGTGATCCA TGCGAATGGA
ACGATTAGCC AGCGGTTCAA AAACGAACGG TACATTGACT CGAAACACCT TCCCGCCGGA
CTTTATGTGA TTAGGGTAAC TACGGGTAAT GGTTACACTG TTTCGAGGAA GATCATACGA
AAATGA
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| Protein sequence | MKNVTRLSPF GVCCFVIVAA LWLPVAVLYA QPAASPLCSS TQHHQKLAIS KSQKQIFDDA
QQRLNAWIAA HHTSRADAVE PVYTIPVVVH ILEPIGSSLL TDAQVHEGIA ELNKAFRNQL
AESDGTDTRI QFRLAVRSPR CTPTTGINRI YTNNAAYTSY GVTGPGGAGL PYDQVYPMSY
WNNLEYYNVW VVNYMDQAAG MAGYPTGSAS PTDGVLIIAP YFTTKLLAHE FGHGMFLGHT
FSRGIGEGDL GTVECPLNDN CAAQGDNVCD TEPVNQSSNY LCPGNPNPLN PCNNNAPYGN
VLKNYMGYNN FSCQTQFTYD QRVRMRGAIE TLRSGLINSK GLDPAVIAQS IPTGTAATLT
ATGCNGQIQW YDATSGGNHL GSGSSYTTPV LEESKTYYAS CLRADCPSDV RVAGLVTVGP
GLPVTLVAFG ASIWEENQVL LSWATSLEVM HDHFEIESAR DAKTFRKIGQ VSAPFRLASG
VSEYRFTDTP EPPASLVYYR LKQVDQAGDG TAGRYAYSRI VHVRMPDTHG ITISPNPAEQ
RIHVDGVSQN WDVEVIHANG TISQRFKNER YIDSKHLPAG LYVIRVTTGN GYTVSRKIIR
K
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