| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1556 |
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| Symbol | |
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| ID | 8225127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1857742 |
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| End bp | 1859511 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929414 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003085966 |
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| Protein GI | 255035345 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.31558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAA ATAAAATACT TAGCTATACC CTTGCCGCGA TGCTGCTCGC CACGGCAAGC
TCCTGCGACC TGAACGAGGT GCCGGTGGAT ACCGCTACCA ACGAAGCGGT GTTCAGCTCG
GAAGCGGGCC TGGAACTTTA CGCCAATTCA TTTTATGACC TGCTCCCCAA CACGGACGTG
GGCGTGTTCC AGATTGACGA CAACTCCGAC CTCGTGGCCC GCAACGGCGT GGACGATTAC
CTCGCTGTGA ATGCATTGAG CCCCATTACC AGCAGTGGAT GGACCTGGAC GCAGCTACGT
AATATCAATT ATTACATTGA AAATACGCAG AAAAGCACCG TCGCTACCAA AAACCATTAC
CTCGGCGTGG CGCGCTTTTT CCGGGCGTTG TTTTATTTTG AGAAGGTCAA AAGATTCGGT
GATGTGCCCT GGATCGAAGA AACCATTGAT GTGAACGACG ATGCGGCGCT TTACGGCGCG
CGCATGAACC GCTACGAGGT GATGGACAAA GTGCTGGCCG ACCTGAACTT CGCGATCGAG
AACATTACAC TCACCTCCGA CCCGTCGGTT ACGCGCATTA CCAAAAATGT AGCCCGCGCC
TACAAGACCC GCATTGCCTT GTTCGAGGCG TCGTGGCGCA AGTACCATAC CGAAGACAAC
AAGCAGTCGA CGGCCGATGC GTGGTATGAA GAGGTAGTTA AAGAAGCGAA TGCGATCAAT
GGTTACACGC TGCATTCGAC GGTGGCCGAC AAGTCGTACC GCGAGCTGTT CCTTGCCAAA
ACGGCTTTCG CCGACGAATC GATCCTTTCC GTAGCGCTGA GCGCCAGCTT GCAGGTGTAC
AGCTCGGCCA ACCGCCGGTT TATCAGCCCT ACTTATGGTA ACCGCCCAAG CCTCACGCGC
CGTTTTATCA ACACCTACCT TAACCTGGAT GGAACGCCAT TCACCAGCAA GGCAGGCTAC
GAAACGACGC CGTTTGTGGA AGAGGTCAAA AACCGCGATC TGCGCCTGAA ACAAACCATC
CGCACGGGCG ATTACACCCG CACGGAAAAC GGCCTGCCCG TGATCGCGCC GCCGAATTTC
AGCCAGACCA ACACCGGCTA CCAGCCCATC AAATGGTGCT ACGACGAACG TTTCCCGTTC
GACGACGAAA GCCGCAACGA CAATGCGCAC ATCGTGATGC GCTATGCCGA AGTGCTGCTC
AACAAAGCCG AAGCATTGGC CGAGCTCGGC AAAATGACCG CCGAAGACTG GACTACGACC
ATTGGTGCCC TCAGAAAGCG TGCAGGCATT ACCGGCGCCA CGCTCACGAC GCTGCCTACC
AAGGCCGATC CCTACATGGT ATCGTTCTTC GGCGGCAAAT TCAGCAACCC GGTGCTGCTT
GAAGTACTGC GCGACAGAGG TACGGAAATG GTATTCGAAG GCCTGCGCCC CGACGACCTG
AGAAGATGGA AGCTCGGCAA GTTGTTCCAG GACGCGCCGA TGAACGGCAT GTACGTGCCC
GCCCTCGGCG AATACGACCT GAACGGCGAC GGCAAAAACG ATGTGTACTT TTACCAGGGC
ACCAAACCCA CGTCGACCAC GCCGGGCATC GCATTCGTGG ACGTAACCCC GTCCACAGCC
GTTGGCCGCG TTCAGCTTTC GAAAGGCACT TCCGGAGAGG TTATATGGAA TCCCGGCCAA
CGCGAATGGG CGGATAAGAA ATACCTCTAC CCCATTCCCG AGGCCGACCG GATCAGAAAC
CCGGCCCTGG GCCAGAACCC GGGCTGGTAA
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| Protein sequence | MKTNKILSYT LAAMLLATAS SCDLNEVPVD TATNEAVFSS EAGLELYANS FYDLLPNTDV
GVFQIDDNSD LVARNGVDDY LAVNALSPIT SSGWTWTQLR NINYYIENTQ KSTVATKNHY
LGVARFFRAL FYFEKVKRFG DVPWIEETID VNDDAALYGA RMNRYEVMDK VLADLNFAIE
NITLTSDPSV TRITKNVARA YKTRIALFEA SWRKYHTEDN KQSTADAWYE EVVKEANAIN
GYTLHSTVAD KSYRELFLAK TAFADESILS VALSASLQVY SSANRRFISP TYGNRPSLTR
RFINTYLNLD GTPFTSKAGY ETTPFVEEVK NRDLRLKQTI RTGDYTRTEN GLPVIAPPNF
SQTNTGYQPI KWCYDERFPF DDESRNDNAH IVMRYAEVLL NKAEALAELG KMTAEDWTTT
IGALRKRAGI TGATLTTLPT KADPYMVSFF GGKFSNPVLL EVLRDRGTEM VFEGLRPDDL
RRWKLGKLFQ DAPMNGMYVP ALGEYDLNGD GKNDVYFYQG TKPTSTTPGI AFVDVTPSTA
VGRVQLSKGT SGEVIWNPGQ REWADKKYLY PIPEADRIRN PALGQNPGW
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