Gene Dfer_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1530 
Symbol 
ID8225101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1828845 
End bp1829246 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content55% 
IMG OID644929388 
Productresponse regulator receiver protein 
Protein accessionYP_003085940 
Protein GI255035319 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.873675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.960974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT TCCGACTTGC CATTGTTGAA AATGATGAAG ACGAACGGTA CTTCATGTCG 
GAGGCATTCA AGGCCTCCGG GGAATTCCAG ATCCTCGGAG AATTCGGCAA CGGCGACCAG
CTGACCGATT GGCTCCACGG CCGGCCCGCC GAACTGCCCG AAATCGTGCT GTCGGACCTG
AATATGCCCG GGAAAAACGG GTACGACATT ATCCGGGAAC TCAAAGTGGA CTATCCCGGC
ATCGCCGTCA TCGCAACTTC CACGTCGTCC GTCGTATCCA CCCGCGAGAA ATGCATTTCC
GCCGGCGCCA AGGATTTTAT TGCCAAACCC GACATATTCA TCGCCTACGA GGCATTCGTG
AAGGAACTTT ACCAGCTGGC CTGCCGCGAT CTGGGCGCCT GA
 
Protein sequence
MKIFRLAIVE NDEDERYFMS EAFKASGEFQ ILGEFGNGDQ LTDWLHGRPA ELPEIVLSDL 
NMPGKNGYDI IRELKVDYPG IAVIATSTSS VVSTREKCIS AGAKDFIAKP DIFIAYEAFV
KELYQLACRD LGA