| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1525 |
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| Symbol | |
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| ID | 8225096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1823848 |
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| End bp | 1824768 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929383 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003085935 |
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| Protein GI | 255035314 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAT CTACTTCGCT GAGCCGCAGG GGTTTCCTGA TGGCCGCTTC CGCCGGACTG
GCCCTGCCTT TCGTCCGGCC TTTCCATTTT CAGGGCAAAG CCAAGCCGCT CTTTTCATTT
TCAACACTCG CCTGCCCGAA ATGGGACTGG GCGACGATCG TCAAATATGC CGCCGACAAT
GGCTACAAAG GCATCGAGAT CCGAGGGGTG CTGGATTGTA TGGATCTGCC TAAATGTGAG
GATTTCAATT CGCCGGCCAA CATTGCGCGC TCGCGGGCGA TGGCTGAGGA AAAGGGGCTG
AGGATCGTGG ACCTGGGCTC ATCGGCGTCG CTCCACATGG CCGATCCCGC GGTGCGTGCC
AAAAACCTGG ACGAAGCCAA GCGGTTTATC GACCTGGCTC AGCAGCTCAA TTGCCCGTTT
GTGCGCGTAT TTCCGAATGA TTTGCCGAAA GACCAGGAAG TGGAGAAAAC CATCGAACTG
ATCAGTTCCG GGCTGCTGGA ACTGGGCGAG TATGCCAAAA AGACATCCGT AACGGTGCTG
CTCGAATCGC ATGGCGATGT TACCGGCAAG GACATCCTAG CCAAGGTAAT GGGCCGGGCT
GAACACAAGC ACGTCGGGCT CATCTGGGAC ATTTTCAATA TGTGGTCGGT CACGAAAGAG
CCGCCTGCGG AGGTATACCG GACATTGAAA AAGTACATCC GCCACACCCA TATCAAGGAC
GGCATCCTGG AAGGCGGCAA AATCCGCTAT ACACAGGTCG GAAAAGGCGA GGGGCCGCTG
CGAGAGGCCA TCAGCGTGCT GGTGAAAGAC AATTACAAAG GCTATTATAG TTTCGAATGG
GAGAAAAAGT GGCATCCCGA AATCGAAGAT CCTGAAATTG TCATCCCGGC ATTTCCCGGG
CTCATGCAGC AGTACTTTTA A
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| Protein sequence | MNQSTSLSRR GFLMAASAGL ALPFVRPFHF QGKAKPLFSF STLACPKWDW ATIVKYAADN
GYKGIEIRGV LDCMDLPKCE DFNSPANIAR SRAMAEEKGL RIVDLGSSAS LHMADPAVRA
KNLDEAKRFI DLAQQLNCPF VRVFPNDLPK DQEVEKTIEL ISSGLLELGE YAKKTSVTVL
LESHGDVTGK DILAKVMGRA EHKHVGLIWD IFNMWSVTKE PPAEVYRTLK KYIRHTHIKD
GILEGGKIRY TQVGKGEGPL REAISVLVKD NYKGYYSFEW EKKWHPEIED PEIVIPAFPG
LMQQYF
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