| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1503 |
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| Symbol | |
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| ID | 8225074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1796668 |
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| End bp | 1800216 |
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| Gene Length | 3549 bp |
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| Protein Length | 1182 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929361 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_003085913 |
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| Protein GI | 255035292 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.531436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCTCT GGCTGTACAG CGGAGGCCTT CGGGCGCAGA CGTTATTCCA GAACATCCGC
TGGCAGGATG GCCTTAGTGC AAAGCAAATC CGCTGTTTGT ACAAAGATTC ATCCGGCTTT
TTGTGGATTG GCACGTCTGC CGGCCTCGAC CGTTACGACG GTGCCGTCGT CCGGCGTTTT
CATGATGCGG CGGGAGGTCA GAAGCATTAT GTGAATGCGA TTTGGCCGTT CGGCGGAGAG
GACACGCTGA TGATCGGCCT GCGGCGCGGT GTGCTTTTGT TTGATAAAAA AAACGGCCGC
TTTTCGCATG ATCCCCGGTT TCGAGAGCTG GCAAATCGCT ACATCGTCAG CATCCGTCAG
GATGGCCGGC AGCGCATCTG GATCGGGACC TCCGATGGCC TGTTTGTTTA CCAAAATAAT
AAACTAGGTC CTGTCACCGA TCTGTTTCCC GACGCCCGCA AATTCGATTT CCGTGGCTTT
GAGCTAAAAG TGATGGTGTA CGATACGCTG AGACGCGGGA TGTGGGTAGG AGGTAACCGG
CCGCTGTTTA TCGATTGCAA AGCCGACCGC GTATACTTCA AAGGAAACAA TGTCCTGCGC
AGCCCGCTGC TCGAATCGGC GAAAGTGCAC GCGATCGCCG TCGACCGTAC GGGAAATGTG
TGGTATGGCT GCGATACCGA CCCGTCGCTG AACTACTGGA ACTACCGCAC CGGCAAAGTG
GACACGCATT ATGCGCTGGA TGGCAAGCTG ATTGGTGAGG GCTGCAATTT CATTTTTATG
GACCGGCAGG ACCGGCTGTG GGTCTCTACC TGGCTCTTTG CGGCATTTGT GAAAGAACCG
GGGCAGCCTT TCCGCAAAAT CGAATACAGC CAGGACCAGG CCTACACCAT CGCTTACGGG
CATTTTCGGG ACGCGATTTC CGACGCGCAA GGCAATGTAT GGCTCGGGAC GATCAATGGC
GTGAGCAAAA CGCTCCCCAA AAATCCCATC GAGGCGATTT ACAAACTGCC CAGCTTTCCG
TTTTTTCTCG AAACAAACTT TGCCCATGCC AACTCCATCA CCGTCGACGG CAGCATGATC
GTGGCCTGCA AGGAAGATGG CGTTGTGTTC TACAACACGG CAGATCGCAA ATACCAGAAA
TTCGTGACGC CCAGCAAACG GCTGCGCAAT AACCGGTTCG TTATGACCGC CAAAGTGGAC
GATACCTGGT GGTTTGCCGG TTTCGACGGT ATTTACTCAC TCTCGCCCGG AGAAACCGTG
TTGCGGCGCT TCAACCAGAC GAAGCCCGGC CTGGCATCCT ACGAAGCACC CTTTGTTTTT
TTGGATAAAC AAAAAAATAT ATGGTTCCAG ATTGACGGCG ACGCCATTTA CCGCTACCAG
CCGGCTACTA AAACGACCCT GCGGTTTGAC GGTACCGACC CGCGTTACGG CCTTTTCGCA
TTCGCCGATG CACAGGCTTT TATACCGCTT TCAAATGGCG ACATTCTGTT TAGCGTGCAG
GGCAAAGGAA TGCTGCGCTA TGATCACCAA CGCGAGCATT TCTCCATGCT GCCCGCGCCC
GACATTGCCG AGGAGTACAT TTATGAAATG CGCCAAAGCA AAACCGGCGA AATATGGGCC
GCGGCGACTT CCAGCGGCCT GCTCAAAATC GATGCGGGCG GGAAGGTGAT CCGGAGTATC
ACGACGAAGG ATGGCTTGCC GTACGACCAG ATTTCGTCAC TGGGCATTGA CGACAAGGGC
GTAATCTGGT GCGCGAGCCG CGAAGGATTG GCAACGTATG ATCCCGCGAG CAACAATGTG
AGCAAGGTGG AGCTCGATTT GGGCAAGACC TTGCAGGATT ACTGGAATTA CGTGACGCTG
GCCGAGGGCA AAATTTACGC GGTCATGCTC GACCACGTCG TGGTAATCAA CCCGCGGCAT
TTCGCTTCGG TGCCGGTGCA GAAGCCTCCG GCCATTACCT CCGTGAAGAT ATTCGGGCAG
GAGCGGTTGC AGGACCTGGA CGGCGGGCCG CTGGAACTGA ACCCGGACGA ATCGTTCGTC
GCATTCCAGT ACGCCTCGCT CAGTCACCGC GACATTCCGT CGCTGCAATA CAGCTACCAG
CTCGTGGGCC TCGACAACGA CTGGGTGATG GCGGGCCGCA ACATCACGGC GTCGTATACC
AACCTCCTTC CCGGCGAATA TGTTTTCAAA GTGAGAAGTA CCGATGAAAA TGGCCGCTGG
ATGCGCACCG CGCAAACGCT GAGCCTGAAA GTATTGCCGC ATTGGTGGCA AACCTGGTGG
TTTTTCGTTG TGTGCGCCCT TGCGACAGGC GGTTCGCTCT ACTGGTTTGC CCGGATTTAT
ACTAAAAGGC GGCATAAGAA GGATCTCGAC GACACGATCG AGTACTTTGC CAACAGCGTT
TACGGGGATA ACTCGGTGAA CGAAATTTGC TGGGACATTG CCCGCAATTG CATTTCAAAG
CTGCATTTCG AGGATTGCGT CGTGTATTTG CTCGATAAGG AAACCAACAC ACTCATCCAG
AAAGCCGCCT ACGGTCCCAA AAGTCCGAAG GAATATGAAA TCCTGAACCC GATCGAAATA
CCGGTCGGCG AGGGGATCGT GGGCACGGCG GCCGCCACCG GGTTGCCGCA AATCATCGGC
GACACGTCCA AAGACCCGCG TTATATCATC GACGACCAGG CGCGGTTTTC GGAACTCGCC
GTGCCCATTC TGCACGAGGG CCAGGTGATC GGCGTGATCG ACTCGGAGCA TCCCAGCAAG
AATTTTTATA ACCACGATCA CGTCCGTGCG ATTTCCACGA TCGCGGCCAT CAGCGCCAAC
AAAATCACCG AGGCTATGGC CCGCGCGCAG GCGGAAAGGC AGGAGATTAT GCTGCTTCGC
ATTAATAAAA TGCTGGCGGA GAGTCAGCTA ATGGCCCTGC GTGCGCAGAT GAACCCGCAT
TTTATCTTTA ATTGCCTGAA TAGCATACAG GAATGCATCG TCACCCAGAA ATACACCGAA
GCGAGCAAGT ACCTGAATAA ATTCGCCAAG CTGTTCAGGC TGGTGCTCAA CAACTCGGGC
AGGAACCTCG TCACGATCGC CGAGGAGCGC GACGTGCTGG AACTTTACCT CGAACTGGAA
CTGATGCGTT TCGGACAGGG ATTTACCTAT TCCATTGAAA TAGATCCCGA GCTGGAAGAC
GATTATGTGC GCCTGCCGTC CATGCTGCTG CAACCGTTCG TGGAAAACGG GCTGTGGCAC
GGGCTCATGC ATAAGCAGGG CGACCGGCAC ATGCGGATCA GTTTTTTCCT GACCGGCCCC
GAACAATTCG CCTGCGAAAT CGAGGACAAC GGCATTGGGA GGAAAAAATC GGCAGAACTA
CGCCAGAATT CCTCGCGTAC ACGGGAACAC GAGTCGCGCG GGATACGTAT CTGTGAAGAC
CGGATCGACG TGCTGGCGCG GCAGGGGAAC CACGCGCAGA TGGAGGTGAC AGACCTTTAC
GACGACGCCG GCAACCCCAC CGGAACGCTT GTCAGAATAG AATTATCCAC CTATTTATAT
CAAACCTAG
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| Protein sequence | MGLWLYSGGL RAQTLFQNIR WQDGLSAKQI RCLYKDSSGF LWIGTSAGLD RYDGAVVRRF
HDAAGGQKHY VNAIWPFGGE DTLMIGLRRG VLLFDKKNGR FSHDPRFREL ANRYIVSIRQ
DGRQRIWIGT SDGLFVYQNN KLGPVTDLFP DARKFDFRGF ELKVMVYDTL RRGMWVGGNR
PLFIDCKADR VYFKGNNVLR SPLLESAKVH AIAVDRTGNV WYGCDTDPSL NYWNYRTGKV
DTHYALDGKL IGEGCNFIFM DRQDRLWVST WLFAAFVKEP GQPFRKIEYS QDQAYTIAYG
HFRDAISDAQ GNVWLGTING VSKTLPKNPI EAIYKLPSFP FFLETNFAHA NSITVDGSMI
VACKEDGVVF YNTADRKYQK FVTPSKRLRN NRFVMTAKVD DTWWFAGFDG IYSLSPGETV
LRRFNQTKPG LASYEAPFVF LDKQKNIWFQ IDGDAIYRYQ PATKTTLRFD GTDPRYGLFA
FADAQAFIPL SNGDILFSVQ GKGMLRYDHQ REHFSMLPAP DIAEEYIYEM RQSKTGEIWA
AATSSGLLKI DAGGKVIRSI TTKDGLPYDQ ISSLGIDDKG VIWCASREGL ATYDPASNNV
SKVELDLGKT LQDYWNYVTL AEGKIYAVML DHVVVINPRH FASVPVQKPP AITSVKIFGQ
ERLQDLDGGP LELNPDESFV AFQYASLSHR DIPSLQYSYQ LVGLDNDWVM AGRNITASYT
NLLPGEYVFK VRSTDENGRW MRTAQTLSLK VLPHWWQTWW FFVVCALATG GSLYWFARIY
TKRRHKKDLD DTIEYFANSV YGDNSVNEIC WDIARNCISK LHFEDCVVYL LDKETNTLIQ
KAAYGPKSPK EYEILNPIEI PVGEGIVGTA AATGLPQIIG DTSKDPRYII DDQARFSELA
VPILHEGQVI GVIDSEHPSK NFYNHDHVRA ISTIAAISAN KITEAMARAQ AERQEIMLLR
INKMLAESQL MALRAQMNPH FIFNCLNSIQ ECIVTQKYTE ASKYLNKFAK LFRLVLNNSG
RNLVTIAEER DVLELYLELE LMRFGQGFTY SIEIDPELED DYVRLPSMLL QPFVENGLWH
GLMHKQGDRH MRISFFLTGP EQFACEIEDN GIGRKKSAEL RQNSSRTREH ESRGIRICED
RIDVLARQGN HAQMEVTDLY DDAGNPTGTL VRIELSTYLY QT
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