| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1487 |
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| Symbol | |
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| ID | 8225058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1767301 |
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| End bp | 1768986 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929346 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003085898 |
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| Protein GI | 255035277 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.424946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGACA TGAATATAAA AAGCTTGAAA CTACCCGGTT TGGCCGTGGC TGCGCTCCTG
ACGGTGACTG CCTGCGACCA GAACTTCCTC GACGTCGTGC CGACCGACCG TGTCTCCGAT
GCCTCCATTC TTTCCGATTC GGTACTTTTT GAAGCCTACG TGACCAACCG CTACATGGGC
GTGCGGCTCA CGGACAAGGA AGCGGAAGGA ACGCTGCCGG GCTTTGGCCG CGGATTCGAA
TATGCAATGT GGTCGTCACT TACCGATGAG TCCATTTATA ACAATGACGA CAATACCTGG
CTGATCCAGC GGGGACAAAT TGCGCCTGAG AATACCGGTA TCGCGGGCAC ATTCTGGGGT
CGCAGCTACC GCAGCATCCG TGAGGTGAAC TATGCATTGG CGAACATTGA GCAGGTGCCG
ATGAGCGCCG GCCGCCGCAG CCGCTTGAAG GGCGAATTGC AGTTTATCCG CGCATTCCGC
TACCACGACC TGATCCGTAA CTACGGAAAA GTGGTGCTCA TGGGCGACAA AGTTTCGGAG
GTAAGCGACG ACCTCACCAG CCCCGAGCTG TTCCAGCGTG CCGAAATCAA AGCGGGCCTC
GACTACGCCA TCGCGCAGCT CGACGAAGCA ACCGCATTGC TGCCGGCATC GAATGACAAC
AACTGGAAAC TCGGCCGTGC CACCAAAGGC GCCGCAATGG CTTTGAAATC GCGTCTGGCC
CTGTACGCGG CGAGCCCGCT TTACAATGCC GGAACCTGGC AGCAGGCAGC AGCGGCAGCC
AAAGCAGTGA TGGATTTGAA CAAATACAAC CTGTACACCG GCGGATACGG CAACCTTTTC
ATCACTTCCG ACAACCCGGA GATCATTTTC GGTCGACTGT ACGCCATTGG CGCGCGCCAC
GTGTGCCTCG AAATCGCGAA CGGTCCTAAT GGCTACAATG CATGGGGCGG TAACGTGCCG
GTGCAGAACC TGGTAGACGA CTATGAAATG ATGGACGGCA CGCGCATCAC CGACGCAAAT
ACGAGCTACG ACCCGAAAAA TCCGTACAAA AACCGCGACC CGCGCTTCTA CGCGACCATC
CTTTACAATG GCGCACCTTA CCGCGGCAGC ACCGTGGAAA CGTTCACACC GGGTGGAAAG
GATAGCAAAG ACGGCCCTTC GAACTGGAAC ACGTCGAAAA CCGGCTACTA TCTGAAAAAA
TTCATGAACG ACAACCTGCC GATCGAAAAC CCGTGGGATG TAGCTGGTAC GCAAACCTGG
ATTTACTTCC GCTACGCCGA GATCCTGTTG AACTACGCCG AGGCGCAAAA CGAAGCGACT
GGTCCTGATG CAAGCGTTTA CGCGGCCGTG AATGCGGTAC GCCAGCGCAC AGGCGTAGGC
ATGCCTGCAT TGCCTGCGGG CCTCACGCAG GCGCAAATGC GCGAGCGTAT CCGTGCTGAG
CGCCGCATTG AGCTGGCGTT TGAGGAGCAC CGTTTTTATG ATGTTCGTCG TTGGAAAATC
GCCAGCACCA CCGAAAATGC GCCTGCTTAT GGTGTGGAAA TCGGTAAAAC CGGCAACACG
TTTACTTACA CCCGTAAAGA GGCGCTTACC GGCCGCAGTT TTGCCGACAA GCAGTACTGG
CTGCCTATCC CGCGCACCGA GATCCAGGCT TCGAATAACC AGCTCGAACA AAACCCGGGC
TATTAA
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| Protein sequence | MIDMNIKSLK LPGLAVAALL TVTACDQNFL DVVPTDRVSD ASILSDSVLF EAYVTNRYMG
VRLTDKEAEG TLPGFGRGFE YAMWSSLTDE SIYNNDDNTW LIQRGQIAPE NTGIAGTFWG
RSYRSIREVN YALANIEQVP MSAGRRSRLK GELQFIRAFR YHDLIRNYGK VVLMGDKVSE
VSDDLTSPEL FQRAEIKAGL DYAIAQLDEA TALLPASNDN NWKLGRATKG AAMALKSRLA
LYAASPLYNA GTWQQAAAAA KAVMDLNKYN LYTGGYGNLF ITSDNPEIIF GRLYAIGARH
VCLEIANGPN GYNAWGGNVP VQNLVDDYEM MDGTRITDAN TSYDPKNPYK NRDPRFYATI
LYNGAPYRGS TVETFTPGGK DSKDGPSNWN TSKTGYYLKK FMNDNLPIEN PWDVAGTQTW
IYFRYAEILL NYAEAQNEAT GPDASVYAAV NAVRQRTGVG MPALPAGLTQ AQMRERIRAE
RRIELAFEEH RFYDVRRWKI ASTTENAPAY GVEIGKTGNT FTYTRKEALT GRSFADKQYW
LPIPRTEIQA SNNQLEQNPG Y
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