Gene Dfer_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1458 
Symbol 
ID8225029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1730724 
End bp1732256 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content56% 
IMG OID644929317 
ProductFG-GAP repeat protein 
Protein accessionYP_003085869 
Protein GI255035248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.664188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.305041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGT TAAAATGGCT TTCAGGATTG CCGCTCGGCA TTTTTGCGGT GGCGGTGTGC 
ATGCAGGCGT GCGGTACGAG CGGACAATCG GGGGAAAACG AGCTGACCGG CGAACTGGCA
CAGGGACGGG ATGCGGCCCA AAGGCATTGC AGCACCTGCC ATTTGCCGGT AGATCCTGCA
TTGCTCGACA AGGATACCTG GAAAAACCGC GTACTGCCGG TAATGGCCCA ATATTTCGGG
ATTGAAGTGT GGCAGCGCAA TCAGTATTTT GCCGGCGAGC GCGCCGCTAT GCCCATCGCC
GAATGGATGC AGATCGTTGC TTATTACGAC TCCCTCGCGC CCGTGAGCCT GCCCGCTGCC
CGCCCGACCG TGCCCGTGTG CGAAGAATGG GCCGGTTTCA GCCTGAAAAC CCCCGCTACC
GACACCTCGC GTATTGCCAC CACGACGCTC GTGGCCATCG ACAGCGCACG CAGCACGATT
TACACGAGCA GTTCCGAAAC GCCTTCGCTC ATGGCCTGGA ACACGGCAAT GACGAAAACA
ATGAAAGCGC CGCTCTCATC ACCGGCGATG CATATGTTGT TTGAAGACGA GCCCGTGCTC
ACCGTGGTGG GAGAAATGCG TGCCTACGAC GTCACGCAGG GCGAGCTCCG CCGTTTCAAA
CGATCCGGTG CCAACGATCC GAAGCCTTTG ATAACAGGAC TGCGCAGGCC GCTGCATACG
GCTGCGGCGG ATTTCAACCG CGACGGTAAA ACGGATTACG TAGTTTCGGC TTTCGGCCAT
AACCAGGGCG GGCTTTATGA ATTCCGCCAG CTGAATGACG GGAAGTTTGA ACAAATCCCC
ATCCGCGAAG CGGCAGGTGC AACGCAATCC TACACGGGCG ACTTCGACGG CGACGGCTGG
CCGGATATTA TCGCGCTCTT CGCGCATGCG CAGGAAGGCA TCTGGCTTTT TACCAATGAT
CGCAAAGGTG GGTTTTCCGA AAAGCCTTTG CTCCGGTTTC CGCCTGTTTA CGGTTCGTCC
AGTTTCCAGC TCACCGATTT CAATGGCGAC GGGCTTCCCG ATATCCTTTA CACCGCCGGC
GACAATAGCG ATTATTCCCG CATTCTCAAA CCTTATCACG GCATTTATAT TTATCTCAAC
AAAGGCGATT TTCGTTTAGA GCAAAGCTGG TTTTTTCCTG TAAACGGAGC CACAAAGGCC
ATTTCGGTAG ATTTTGACGG CGACGGAGAC CCTGATATCG CTTGCGTCGC ATTCTTCGCG
GACCTTCTGC GAAACCCCGG TGAAAAGTTT CTCTATCTCC GAAACGAAGG AGGCAATGGC
TTGAAATTCC AGCCCTTTTC GCCGCCCATT GCCGGGCAGG GCCGCTGGAT TTGCATGGAT
GTGAACGACT GGAACGGTGA TGGCCGCCCG GACATCGTGC TGGGTAATTA TTCCAAAGGA
TTTCTGAACC AGGAAGAGGT GAAGGCCGAT TGGAATGTGT ACCTGCCATT TATCATCCTG
CAAAACGAAA CCCACTCCGC TAATGCGCAT TAG
 
Protein sequence
MNWLKWLSGL PLGIFAVAVC MQACGTSGQS GENELTGELA QGRDAAQRHC STCHLPVDPA 
LLDKDTWKNR VLPVMAQYFG IEVWQRNQYF AGERAAMPIA EWMQIVAYYD SLAPVSLPAA
RPTVPVCEEW AGFSLKTPAT DTSRIATTTL VAIDSARSTI YTSSSETPSL MAWNTAMTKT
MKAPLSSPAM HMLFEDEPVL TVVGEMRAYD VTQGELRRFK RSGANDPKPL ITGLRRPLHT
AAADFNRDGK TDYVVSAFGH NQGGLYEFRQ LNDGKFEQIP IREAAGATQS YTGDFDGDGW
PDIIALFAHA QEGIWLFTND RKGGFSEKPL LRFPPVYGSS SFQLTDFNGD GLPDILYTAG
DNSDYSRILK PYHGIYIYLN KGDFRLEQSW FFPVNGATKA ISVDFDGDGD PDIACVAFFA
DLLRNPGEKF LYLRNEGGNG LKFQPFSPPI AGQGRWICMD VNDWNGDGRP DIVLGNYSKG
FLNQEEVKAD WNVYLPFIIL QNETHSANAH