| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1440 |
|---|
| Symbol | |
|---|
| ID | 8225011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 1707226 |
|---|
| End bp | 1708611 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644929299 |
|---|
| Product | Xaa-Pro dipeptidase |
|---|
| Protein accession | YP_003085851 |
|---|
| Protein GI | 255035230 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.377937 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCTA AATCAACATA CTTAAACCGC AGACAGACAC TTCAATCCGG ACTCGGCAGC
GGACTGCTGC TTTTCCTCGG CAATGAAGAA AGCGGCATGA ACTACCGGGA CAATGTATAT
CCGTTCCGCC AGGACAGCAC ATTTCTTTAC TACTTCGGCA TCGACCACGC GTCGCTCACC
GCAGTGATCG ACATCGACAA TAACCGCGAA ATCATCTTCG GCGACGAGCT CACCATCGAC
GACATCGTGT GGACCGGCCC CAAGGAACCG ATCACCGAAA AAGCCGCCAA AGTGGGTGTT
ACCGAAGTAA AACCGACCTC GGCCATCGGC AGCTTTTTGA AGGACGCGGT ATCGCGCGGC
CAGACCATCC ATTTCCTCCC GCCCTACCGC GGCGAGCATT ACCTGAAATT GCAGGAGTGG
CTGCATATCA ATCCTGCCGA AGCCGCTCAA AAGGCTTCCG TGGCGTTCAT AAAGGCGGTA
GTATCCATGC GCTCGTACAA AACGGACGAA GAAGTGGCTG AAATCGAGAA GGCAGTGAAT
ACCTCCGTGG ACATGCACCT CGCATTCATG CGCAGGACAC GCGCAGGCAT GACCGAAAAG
GAGATCGCCG GCAACCTGCA AAGCATCGCC ATCGCGCAGG GCGGCGACAT TTCCTACCCC
ATCATCCTCA CTGTGAATGG CGAAATCCTG CACACGCACG CCCGCGACCT CGCCATCCGC
GAAGGGCAAA TGGCCCTCTG CGACGCCGGT GCGGAAACCG CCATGCATTA CTGCGGCGAC
CTGACGCGCA CCATTCCCGT GGGCAAATCG TTTAGCGGCA TTCAGAAAGA AATGTACGAA
ATCGTGCTCC AAGCGCAGGA AGCAGCCATT GCAGCCTGCA AGCCGGGGGT TTTGTTTAAA
GACATCCACA AACTGGCCTC GACAAAGCTC GTGGAAGGCA TGAAACAAGT GGGCGTCGTA
AAAGGCGACG TAGCTGAAGC CATCGAACAC GACGTGCACA CCCTCTTCTT CCAATGCGGC
CTCGGCCACA TGATGGGCCT CGACGTACAT GACATGGAAA ACCTGGGCGA ACAATACGTC
GGCTACACCG ACGACCTGCA AAAAGGCACC GCTTTCGGAT GGAAATCCCT CCGCCTGGGC
CGCGCCCTCG AACCCGGTTT CGTCGTCACC GTAGAGCCCG GCCTCTACCT CATCCCCACC
CTCATCGACC GCTGGAAAGC CGAAAACAAA CTCTCGCAGT TCATCGACTA TAACAAACTC
GAACATTTTC GGAATTTCAC CGGCATTCGT ATTGAAGATA ACCTTTTGAT AACCGAAACC
GGCAACCGGG TACTCGGGAA GGAACTGGTG AAAAGTGTAG CGGATGTGGA GGGGTTGAGG
GAGTAA
|
|---|
| Protein sequence | MFSKSTYLNR RQTLQSGLGS GLLLFLGNEE SGMNYRDNVY PFRQDSTFLY YFGIDHASLT
AVIDIDNNRE IIFGDELTID DIVWTGPKEP ITEKAAKVGV TEVKPTSAIG SFLKDAVSRG
QTIHFLPPYR GEHYLKLQEW LHINPAEAAQ KASVAFIKAV VSMRSYKTDE EVAEIEKAVN
TSVDMHLAFM RRTRAGMTEK EIAGNLQSIA IAQGGDISYP IILTVNGEIL HTHARDLAIR
EGQMALCDAG AETAMHYCGD LTRTIPVGKS FSGIQKEMYE IVLQAQEAAI AACKPGVLFK
DIHKLASTKL VEGMKQVGVV KGDVAEAIEH DVHTLFFQCG LGHMMGLDVH DMENLGEQYV
GYTDDLQKGT AFGWKSLRLG RALEPGFVVT VEPGLYLIPT LIDRWKAENK LSQFIDYNKL
EHFRNFTGIR IEDNLLITET GNRVLGKELV KSVADVEGLR E
|
|---|
| |