| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1389 |
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| Symbol | |
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| ID | 8224960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1635773 |
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| End bp | 1637524 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929249 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003085801 |
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| Protein GI | 255035180 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.451306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.627889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTAT TTAAATACCT CATCCTTTTT ACGCTGCTGC TCAGCCAGTC GGCGTGCGAT
AAAGACTGGC TGAAACCCGA GCCGCTGTCG TTTTTCAGTC CGGAGAATGT GTTTGTGGAC
AAGGCCGGCA TGGAAGCGCT GCTGATTACC ATGCGCAAAG ACCTCAAAAA CGAGAGTACC
GGCACAATGC CCAACCTCAC AATGGAATTT GCCGCGTCGG ATCTGGCATC GCCGTGGTCG
CAGCTCGATT TCTACAACCT CACGCCGAAC ACCGATCAGT ATTACCGCTT CCTGACGATG
TTTACGGTGA TTTATTCTTC CATCAAAAAC TGTAATGTGC TCATTAGCAG GATTGATGAC
ATTAAATGGG CATCGGACCA GGAGCGCAAC GCCATTCTGG GCGAGGCGCT ATGGCACCGG
GCTTACTGGT ATTACCGCCT CGTGAATTCG TATGGCGATG TGCCGTTTCT GAGTGGTGAA
ATCCAGGAAG CGAAGCTCGA TTTTCAGACG CATAGCCGCT GGACAATCCT GGAAAAGATC
AGAACGGATG TAGAGTTCGC CGCCGAATGG CTGCCGGCCA CGGCCAAGCC GGGGGTAATC
ACCAAAGGCG CCGCCAATCA TTTGCTGACG AAAATCTATC TGGCAAACCT GGAATTCGAC
AAGGCGATCG AAGCCGCGAC GAAGGTGATC AATGGCCCTT ACGCGCTCAT GACCCAGCGA
TTCGGCATCG ATGCCGCGAA GGGCAACCGT AACCTCATGT GGGACCTGCA CCGGCCCAAG
AATTTCAGCA TTACGCAAAA CACCGAAACC ATCCTAGCGG CGATCGACCG GTACGAAGCG
CCCCCCGCCG CACGGTCGGT AGGATTGTAC ACCATGCGAC TCTACAACTG CCAGTGGTTC
CAGCCGCAGG TGCTCGACAG CCAGGGCAAG CCGGGCATGG TAGCGAGCGG GCCGATGTAT
GATTCATTGG GAAGAGGCAA TGCAAATATC AGACTTACAG GTTATTATCA ATATGATATC
TGGTCGTACA AGGGCGCTAC CTGGCGCAAC ACGCCCGATT TGCGGCGCGC GGATATCAAC
TGGGTGGACA TTCATGAGCT GAAATACAAC AATCCCGCGT CGGTGGATTT CGGCAAACCA
ATCAATACCA AATTCCTGGC CGCGCAGGTG GATACCTTCA AGCACGTATA TGCGATGCCG
CATTACATTA TGTACAATCC GCAGGACGAT CCCAAGGCGG TACCGATGGG CGGTAATGGC
GACTGGTATA TTTTCAGGCT AGCCGAAACC TACCTCCTGC GTGCGGAAGC CTACCTTTGG
AAAAACCAGC TCGGCCTCGC TGCCGACGAT ATCAATAAAG TGCGCCAGCG CGCCAAAGCA
ATGCCGGTGT CGGCAGGGGA AGTGACCGTC GATTTCCTGC TGCACGAGCG TGCGCGGGAG
CTTTTCGCCG AAGAACCCCG GCATTCGGAG TTGGTACGGA TTTCCTACAT CATGGCCAAA
GCCGGTTTGA ACGGTTACAG CCTGACCAAT TTCAGCGAGA AGAATTTCTA CTTCGACCGG
GTGATGAAGT ATAACAATAC CTACGAAAAG AAGATCCAGC TACTCGGCAA CACGGCAAAT
ATGGCGCCGT TCCATGCCCT GTGGCCGATC CCTTCACTCG TGATCACCGC CAACACCAAA
GGCGTGATCA ACCAGAACAT TGGCTACGAC GGCGCGAACA GAAACGTGCC GCCGCTGACG
AAAATCGAGT AG
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| Protein sequence | MKLFKYLILF TLLLSQSACD KDWLKPEPLS FFSPENVFVD KAGMEALLIT MRKDLKNEST
GTMPNLTMEF AASDLASPWS QLDFYNLTPN TDQYYRFLTM FTVIYSSIKN CNVLISRIDD
IKWASDQERN AILGEALWHR AYWYYRLVNS YGDVPFLSGE IQEAKLDFQT HSRWTILEKI
RTDVEFAAEW LPATAKPGVI TKGAANHLLT KIYLANLEFD KAIEAATKVI NGPYALMTQR
FGIDAAKGNR NLMWDLHRPK NFSITQNTET ILAAIDRYEA PPAARSVGLY TMRLYNCQWF
QPQVLDSQGK PGMVASGPMY DSLGRGNANI RLTGYYQYDI WSYKGATWRN TPDLRRADIN
WVDIHELKYN NPASVDFGKP INTKFLAAQV DTFKHVYAMP HYIMYNPQDD PKAVPMGGNG
DWYIFRLAET YLLRAEAYLW KNQLGLAADD INKVRQRAKA MPVSAGEVTV DFLLHERARE
LFAEEPRHSE LVRISYIMAK AGLNGYSLTN FSEKNFYFDR VMKYNNTYEK KIQLLGNTAN
MAPFHALWPI PSLVITANTK GVINQNIGYD GANRNVPPLT KIE
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