| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1373 |
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| Symbol | |
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| ID | 8224944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1609198 |
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| End bp | 1612647 |
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| Gene Length | 3450 bp |
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| Protein Length | 1149 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644929233 |
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| Product | membrane-bound dehydrogenase domain protein |
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| Protein accession | YP_003085785 |
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| Protein GI | 255035164 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | [TIGR02603] putative heme-binding domain, Pirellula/Verrucomicrobium type
[TIGR02604] putative membrane-bound dehydrogenase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.376333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TATTATACGG AGCACTGCTC CTTCCCATGG TGCTGATTAC CGCCTCGACC
GAACCCGAGC ACCATTCTTT TAATGTCGAC CCGGATGTTG AAAAGGAACT CAAATCCTTT
AAAGTAGCCG ACGGCTTCGA GGTAACATTG TTCGCCGCTG ATCCGATGGT CGCGAAGCCC
ATTCAGATGA ACTGGGATAC AGATGGCCGC CTGTGGGTGG TTAGCAGCAC GGTGTACCCG
CATTTGAAAA CCGGCGAATC GGCGAACGAT AAGATATTCG TCCTGGAAGA CACCGACGGC
GACGGCAAAG CCGATAAATC GACCGTGTTT GCCGAAGGGC TCATCCAGCC GACCGGTATC
CTGCCGGGCG ACGGAGGCTG CTATGTGGCC AACTCGACGG AAATCCTGCA TTTTGCAGAC
ACCGACGGCG ACGGCAAGGC CGACAAAAAG CGCCGCATCC TGAACGGCTT CGGCACCGGC
GACACGCACC ATTTGATCCA CACTTTCCGC TGGGGACCGG AGGGTAGGAT GTATTTCAAC
CAGTCGATCT ACATTTACAG CCACGTGGAA ACGCCTTTCG GCATCAAACG CCTCGAAGGC
GGCGGTGTGT GGCAGCTCAA CACGCGTAAC CTGGACATGG ACGTGTACGC CCGCGGGCTT
GTGAATCCGT GGGGCTTGCA GTTCGACCGC TGGGGGCAAT CATTCCTGAC CGACGGTGCC
GGCGGTGAGG GTATTAATTA TGCATTTCCC GGCGCTACAT TCGTGACGGC ACCCGGCGCA
GCCCGCCTTT TGCGCGGCTT GAACCCCGGT CAGCCGAAGC ACAGCGGGCT GGACGTCGTT
TCCGGTCGGC ATTTGCCCGA TGCGTGGCAG GGCCGCATGA TCACCAACGA CTTCCGCGCT
AACCGCATTA ACAGTTTCAA ACTGGAAGAG CAGGGTAGTG GTTATGTGTC GAAACAAACC
GACGATCTGA TGTGGTCCGA CAATGTGGCT TTCCGTCCGG TTGATATCAA TGTAGGTCCG
GATGGCGCCA TTTACGTCGC CGACTGGTAT AACCCCATTA TTCAGCATGG CGAGGTGGAC
TTCCACGATC CCCGCCGCGA CCAGCAACAT GGCCGCATCT GGCGGATCGT TGCGAAAAAC
CGCCCGTTGG TCCCAAAACC GCAGCTCGGC AAAGCGAGCG TGAACGACCT GCTCGAATCG
CTGAAACTGC CGGAAGACTG GACGCGCCTG CAAGCCAAGC AGGTTCTGAA AGCGCGCGGA
GCGAAGGAAG TGCTGCCCGC GTTGGAAAAA TGGGTAGGTG CTTTGGATAA AAATGATTCG
AAATATGAGC ATAATCTCCT CGAAGCCTTG TGGTTATATC AAACCCTTGA AACCGTAAAT
GAACCGGTGC TGCTCAATTT GCTGAATGCG AAAACCCACA ATGCCCGTGC GGCAGCCCTG
CGTGCGCTGG CACTCTGGTA CCCGAAGGTT TCGAACACAC CCGCATTGCT GGCGAAGGCA
GTAGGCGACA CCCACCCGCA GGTGCGTCTG GAAGCGGTGA TCGCATTGCG TAAAACCAAG
ACGCCGGAAG CGGCAAAAAC CGCCCTGACA GCGCTCGATG GGCAGATGGA CGAGTTCCTG
GACTTTGCAT TGTGGCAAAC CGTCCGCGAA TTGGAACCGG TGTGGCTTCC GAAACTGAAA
ACCGACGCCA ACCTGCTCGG CGACGCCAAA AAGACTTCCT ATGCATTGAA ATCGGCCACC
GGTGCGGATG CCGCCACATT GCTGACGGCG CTTTACCAGA AAGGCCAGGT GCCGGACGAC
TATCAGAAAG ATGTTCTCGC ATCCATCGCG CGCCTCGGCC AGCCGGCAGA CCTGAATGTG
CTGCTTGATC TGGCAGTGCA GGCCAACAAC AAGCATGCGG CTGCACAATT GGCCGCGCTG
GAAGAGGCTG GTAATCAGCG CCATGTTTCT CCCAATAAAA ACCCTGAACG CATTGCAACG
CTCATCGGCA ACGACGACGA GGCCGTGAAC CTGAGCGCGA TCCGCCTGAT CGGCCTCTGG
AAGCTGAGCT CGCTGAACGA CCGCCTTACC GGCCTGATCC AAAATGGTAA CCCGGCCACT
AAAAAGGCTG CGCTGGGCGC GCTGGGGGCT ATTGATAAGC CCAAAGCGCT GCAACTCGTC
ACCGACCTGA CCGGTGCGAA AAACACGCCG GAAGTGCGCA TTATCGCTGC TGCACAGCTG
GCTTCACTCG ATGCGAAGGA AGGCGCCCGC GTCAGTGCCG AGCTCATGCG CACGCTCCCC
GCGGACACGG ATATGTCGGA ACTGTTTCTC GCATTCATCC CTTCAAACCC CGGTGCTGCG
GCACTAGCGG AGGCAATTGC TGCGAAAAAG ATTCCTGAAA GCGTGGCCAA ACGCGGTCGC
GTGCTGGTGC AGCAGCGTGC CGGCTGGACG CGACAGAGCA TTGACGAGAT CGCCGCATTG
AAAAAAGCCC TCGAGGCGTC GGGAGGCTCG TTGCCTGCTC CCAAAATGCC GCAGGACCTC
GACGACAAGA CGATTGAAGG CCTTGCGAAG CTAGCCCGTG AGAAAGGCGA TGCTGCGAAA
GGTGAACTGA TTTTCCGCAA AGCGGAGTCG AGCTGCACGA CCTGTCACGC CATCGGCGGC
GCGGGCGGGC TCATCGGCCC TGATTTGAGC AGCCTCGGAA CGAGCTCGCC GGCCGAGACT
ATCATCCGGT CGATCCTGTA CCCCAGCGAA TCGATCAAGG AAGGTTACGA TCTCAAACGC
GTCGTGAAAA AAGACGGCTC CGAACTCATG GGTTACCTCG CTTCCGACGG CGCCAACGAC
ATCGTGATCC GCGACGTGAC GGGCAAGGAA GTGTCGATCG CCAAAAGCCA GGTGCAGGTA
ATGGAAAAAG TGCCCGGCTC GCTGATGCCC CCAGGCCTCA CCGCCAGCCT CGACCGCGAC
CAGTTCGTAA ACCTCGTCGC ATTCCTCACG AAGCTCGGCG AACCCGGCGA CTTCCGCGTA
CCGGCGACGC GCTACGTGCG CAGGTGGGAG CATGTGGAGC TGAGCAAAGA CCTGGCTTCC
AAATTCAACA TGGAAGGCGC GATATTTGCC GGAAAAGGTG CAAGGCTCGT AAAGACGCCG
GTATATAGCA AAGTTTCGGG AGAACTGCCT GTGGATGAGC TGCCTGAAAT GCAAAACAGT
GCCGGCAAGC CGTTCAGCAT CGTCAATTTC GAAATCGAAG CGTTGACCAA AGGAACGGTG
TCGCTGGCGC TCAGCAATCC GACGGGCATA ACCGCATACA GCGGCACCAA ACCGCTCAAA
ATCGCCAACG GTACACTGAC CACCGACCTC GCGCAAGGCG TGCAACCGAT CACCCTCATT
CTCGACAGGA ACGCCGTAAA AGCTGGTTTG AAAGTGGAGT TGAAGGATGT GAATGGAGGG
GCACAGACGC GGTTGAAGGT GGGGAGGTGA
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| Protein sequence | MKKLLYGALL LPMVLITAST EPEHHSFNVD PDVEKELKSF KVADGFEVTL FAADPMVAKP
IQMNWDTDGR LWVVSSTVYP HLKTGESAND KIFVLEDTDG DGKADKSTVF AEGLIQPTGI
LPGDGGCYVA NSTEILHFAD TDGDGKADKK RRILNGFGTG DTHHLIHTFR WGPEGRMYFN
QSIYIYSHVE TPFGIKRLEG GGVWQLNTRN LDMDVYARGL VNPWGLQFDR WGQSFLTDGA
GGEGINYAFP GATFVTAPGA ARLLRGLNPG QPKHSGLDVV SGRHLPDAWQ GRMITNDFRA
NRINSFKLEE QGSGYVSKQT DDLMWSDNVA FRPVDINVGP DGAIYVADWY NPIIQHGEVD
FHDPRRDQQH GRIWRIVAKN RPLVPKPQLG KASVNDLLES LKLPEDWTRL QAKQVLKARG
AKEVLPALEK WVGALDKNDS KYEHNLLEAL WLYQTLETVN EPVLLNLLNA KTHNARAAAL
RALALWYPKV SNTPALLAKA VGDTHPQVRL EAVIALRKTK TPEAAKTALT ALDGQMDEFL
DFALWQTVRE LEPVWLPKLK TDANLLGDAK KTSYALKSAT GADAATLLTA LYQKGQVPDD
YQKDVLASIA RLGQPADLNV LLDLAVQANN KHAAAQLAAL EEAGNQRHVS PNKNPERIAT
LIGNDDEAVN LSAIRLIGLW KLSSLNDRLT GLIQNGNPAT KKAALGALGA IDKPKALQLV
TDLTGAKNTP EVRIIAAAQL ASLDAKEGAR VSAELMRTLP ADTDMSELFL AFIPSNPGAA
ALAEAIAAKK IPESVAKRGR VLVQQRAGWT RQSIDEIAAL KKALEASGGS LPAPKMPQDL
DDKTIEGLAK LAREKGDAAK GELIFRKAES SCTTCHAIGG AGGLIGPDLS SLGTSSPAET
IIRSILYPSE SIKEGYDLKR VVKKDGSELM GYLASDGAND IVIRDVTGKE VSIAKSQVQV
MEKVPGSLMP PGLTASLDRD QFVNLVAFLT KLGEPGDFRV PATRYVRRWE HVELSKDLAS
KFNMEGAIFA GKGARLVKTP VYSKVSGELP VDELPEMQNS AGKPFSIVNF EIEALTKGTV
SLALSNPTGI TAYSGTKPLK IANGTLTTDL AQGVQPITLI LDRNAVKAGL KVELKDVNGG
AQTRLKVGR
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