Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1371 |
Symbol | |
ID | 8224942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1607462 |
End bp | 1608196 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644929231 |
Product | Beta-lactamase |
Protein accession | YP_003085783 |
Protein GI | 255035162 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0265267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.207163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATC ACATTCTCAC CTGCCTGCTA GCGCTCGTGT GCGCATACGC GCACGCCCAA ACGCCCGACA AAAGTTTCAA AACCGACGAC CTGATCGTCC AGAAGTTGAC CGACCACACC TATCAGCACC TCACGTACCT GCAAACACAG ACCTTCGGCA AAGTGCCCTG TAACGGCCTG ATCGTGTTCG ATGGCGGCGA GGCGGTGATT TTCGATACGC CGGCAGATGA CGCGACGTCG GAAAAGGTGA TCCGTTGGGT GGAGGATAGT TTGAAATGCA AGGTAAAGGC CGTGATCGCG ACGCATTTTC ACGAGGATTG TGTAGGCGGG TTGAAGGCGT TTCACGAGCA CGGCATCCCC TCCTACGCGA CCAACAAGAC GATTGCATTC GACAAAGAGC ACAAATTTCC CGTGCCGCAA AAAGGTTTCG ACAACAAACT GGAATTGAAT GTGGGTACAA AACCAGTCGT GGCCGCATTC TACGGTGAGG GACATACGCG GGATAACATT ATCGGCTATT TCCCGTCGGA GAAAGTGATG TTCGGCGGCT GCCTGATCAA AGAAGTCGAT GCTACCAAAG GCAACCTCGC CGACGCGAAC GTGGATGTAT GGCCAGCGAC CGTGGCGAAT ATTAGAAAGC AATACAGCGA CGTAAAAGTA GTGATACCGG GCCACGGAAA GATCGGCGGC AGCGAGCTGC TGGATTATAC GATAAAACTG TTTTCACAAA AATAA
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Protein sequence | MQNHILTCLL ALVCAYAHAQ TPDKSFKTDD LIVQKLTDHT YQHLTYLQTQ TFGKVPCNGL IVFDGGEAVI FDTPADDATS EKVIRWVEDS LKCKVKAVIA THFHEDCVGG LKAFHEHGIP SYATNKTIAF DKEHKFPVPQ KGFDNKLELN VGTKPVVAAF YGEGHTRDNI IGYFPSEKVM FGGCLIKEVD ATKGNLADAN VDVWPATVAN IRKQYSDVKV VIPGHGKIGG SELLDYTIKL FSQK
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