Gene Dfer_1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1371 
Symbol 
ID8224942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1607462 
End bp1608196 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID644929231 
ProductBeta-lactamase 
Protein accessionYP_003085783 
Protein GI255035162 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0265267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.207163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATC ACATTCTCAC CTGCCTGCTA GCGCTCGTGT GCGCATACGC GCACGCCCAA 
ACGCCCGACA AAAGTTTCAA AACCGACGAC CTGATCGTCC AGAAGTTGAC CGACCACACC
TATCAGCACC TCACGTACCT GCAAACACAG ACCTTCGGCA AAGTGCCCTG TAACGGCCTG
ATCGTGTTCG ATGGCGGCGA GGCGGTGATT TTCGATACGC CGGCAGATGA CGCGACGTCG
GAAAAGGTGA TCCGTTGGGT GGAGGATAGT TTGAAATGCA AGGTAAAGGC CGTGATCGCG
ACGCATTTTC ACGAGGATTG TGTAGGCGGG TTGAAGGCGT TTCACGAGCA CGGCATCCCC
TCCTACGCGA CCAACAAGAC GATTGCATTC GACAAAGAGC ACAAATTTCC CGTGCCGCAA
AAAGGTTTCG ACAACAAACT GGAATTGAAT GTGGGTACAA AACCAGTCGT GGCCGCATTC
TACGGTGAGG GACATACGCG GGATAACATT ATCGGCTATT TCCCGTCGGA GAAAGTGATG
TTCGGCGGCT GCCTGATCAA AGAAGTCGAT GCTACCAAAG GCAACCTCGC CGACGCGAAC
GTGGATGTAT GGCCAGCGAC CGTGGCGAAT ATTAGAAAGC AATACAGCGA CGTAAAAGTA
GTGATACCGG GCCACGGAAA GATCGGCGGC AGCGAGCTGC TGGATTATAC GATAAAACTG
TTTTCACAAA AATAA
 
Protein sequence
MQNHILTCLL ALVCAYAHAQ TPDKSFKTDD LIVQKLTDHT YQHLTYLQTQ TFGKVPCNGL 
IVFDGGEAVI FDTPADDATS EKVIRWVEDS LKCKVKAVIA THFHEDCVGG LKAFHEHGIP
SYATNKTIAF DKEHKFPVPQ KGFDNKLELN VGTKPVVAAF YGEGHTRDNI IGYFPSEKVM
FGGCLIKEVD ATKGNLADAN VDVWPATVAN IRKQYSDVKV VIPGHGKIGG SELLDYTIKL
FSQK