Gene Dfer_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1358 
Symbol 
ID8224929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1595482 
End bp1596237 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content55% 
IMG OID644929219 
Productputative metallo-hydrolase/oxidoreductase 
Protein accessionYP_003085771 
Protein GI255035150 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0896223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA CGTTCACCTT TTTAGTATTG TTCGCAGCGT CGCTCTGCTT CGCCCAACTT 
CCCAAACCCG ATGAAATCCC GACCTCCAAA GGTCCGCTCA AAATCCAGCC GCTCAACCAC
GCCACGCTCG CGCTCACGTG GAACGGCAAA ACCATCTACG CCGACCCCTA CCAAGCCCCC
AAAACCTTCG TAGGCATCGC CAAACCCGAC CTGATCGTGA TCACCGACAT CCACGGCGAC
CATTTCGACC CGGCCTCCCT CAACGCCCTC GACCTGACGA ACACCGTGAT CGTCGCCCCG
CAAGCCGTCG CCGATAAAAT GTCCGACGCA TTGAAAGCCA AAACGACCGT CCTCGCCAAC
GGCGCCACCA CCGAAAAACT CGGCATCAGC ATCACCGCCA TCCCGATGTA CAACCTCCCC
GAAACAGCAG ACTCCCGCCA CCCCAAAGGC CGCGGCAACG GCTACATCCT CAAAATGGGC
GGCAAATCCG TCTTCCTCAG CGGCGATACC TCCGGCATTC CGGAGATCAA GGCATTGAAG
AATATCGATG TGGCATTTGT CTGCATGAAT TTGCCTTATA CGATGGATAT TAATGAGGCT
GCGGCTACTG TGGCGGCGTT TAAGCCGAAG GTGGTTTATC CTTATCATTA TCGTGGGCAG
GGTGGGTTCA GCGATACGGA GGCGTTTAAG AAGCTGGTTG TTGAGAAGGA TGGGAAGATT
GATGTGCGGG TTAGGGATTG GTACACGGTG AAGTGA
 
Protein sequence
MKTTFTFLVL FAASLCFAQL PKPDEIPTSK GPLKIQPLNH ATLALTWNGK TIYADPYQAP 
KTFVGIAKPD LIVITDIHGD HFDPASLNAL DLTNTVIVAP QAVADKMSDA LKAKTTVLAN
GATTEKLGIS ITAIPMYNLP ETADSRHPKG RGNGYILKMG GKSVFLSGDT SGIPEIKALK
NIDVAFVCMN LPYTMDINEA AATVAAFKPK VVYPYHYRGQ GGFSDTEAFK KLVVEKDGKI
DVRVRDWYTV K