Gene Dfer_1341 details

Gene Information

• Locus tag: Dfer_1341
• ID: 8224912
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dyadobacter fermentans DSM 18053
• Kingdom: Bacteria
• Replicon accession: NC_013037
• Strand: +
• Start bp: 1572211
• End bp: 1577217
• Gene Length: 5007 bp
• Protein Length: 1668 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644929202
• Product: conserved repeat domain protein
• Protein accession: YP_003085754
• Protein GI: 255035133
• TIGRFAM ID: [TIGR01451] conserved repeat domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.831003
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGAAACC TATACTTCTA CCTGGCAGGC GCCGCCCTGC TCGCGTCGGG CGTTGAAATG 
GTCGGCAGGC TAGCCGAAAC CCCGGCCGTA CCCCAGGAAT GGATCGTCCA AAAGGCGGAC 
AGATCCGTCC GCAACCAGCA AGAGCGGGTT CCGTTCGCCC GCACACGCAA GAAATCGGGC 
ACCAAAGCCC TTCTCGCCCC GAGTATCACC GCCACCAACA CGTATGTCAT CACCAGTAAT 
ACCGGGCCTT CCGGCGCTTC GGCGGGCGAT GAGCTGGAAT ATACCGTCAC CATCAACAAC 
GGCGGGCCCG ACCCTGCCAC GGGAACGGTG TTCACGGAAA CGATCGACGC CAACACAACA 
CTGGTGCCGG GGTCCGTCAA AGCGAGCCCG ATCGCGCAAA ACGATTCCTA CTCGACCATA 
GGAAACGTCG GGATCAACAT TCCCGAAGGC ACGGGCCTAT TCGCAAACGA TGTCAGCCCC 
GCCGGCACGC CCATCAGCCT GAACAGTACC ACGACCGTTG CGACGACGGG CGGTGGTTCG 
GCCACTATCA CTGCGGCTAC CGGTGCTTTC ATTTACGAAC CGGCAGCAGG TTATTCAGGA 
AATGACACTT TTACCTACGA GATTCAGAAC GGATCGGGCA TGACTTCGAC TGCTACGGTT 
ACCATTTCCG TAGGAAGTGC TACCAATATG ATTTGGTTTA TCAATTCGGC TGCCGCTGCC 
GGTGGTACGG GAACGCTGAG CAAACCATTC AATTCCATCT CCGCTTTCAA TAGTATTAAT 
GGTGACGGAG CAGCTTCACA CCCTCAAAAC GGACATGTGA TATTCATTTA TTCCGGATCG 
TACACCGGCC CGCTCACGCT GCGCAACGAC CAGAAAATCC TTGGACAGGG CTCCACGCAG 
TCGATCCTCA GCTTCACAGG GTTCTCCGCT CCGAATGGCA CCAACCAGCT CCCGGCCGTA 
ACCGGAAGCA ACGCAGGCAG GCCTACCCTC ACCACATCGA GCGGAACGGA CAATGCGATT 
AACCTGGGCA CCACCAACAT CATAAAAGGG ATAAATATAG CCAACACGAC CGGCACCAAA 
ATTTCCGGAT CGTCAGCGGG GACATTCACC GCTTCGGAAG TCGGCTTATC AGGCAGCGGA 
AGCGCATTGA ACCTAACGAA CAAAACGCTG AATGCAAGCT TCTCGGAAGT ATCGAGTTCG 
TCTGCGACCA ATGGCGTCAG CCCGATCAGG ATATCATCCG GTAACGGGAC ACTTACCATA 
CCAGCGGGTT CCATCACGTC CACGTCTGTA CCCGCGATCG ACATTGCCGG CAAGGGCACA 
GGCGACAGGA TTGCCCTCAA TGTGACATTG ACCTCCGTAT CAGCTAACGG CGGCTCCAAA 
GGTCTGGCAT TGCAAAATGC CACCGGTTCG TTCCAAATTA ACGGTACCGG CACAACAGGG 
GGATCAGGCG GGACCATTCA GAACATCGCC GACCGCGGGA TCGATTTACG TGACGTTCAG 
AATATCACGA TCAAAAATAT GAACCTGGCG AGTGCCAATA CGGCAGAGGG GCCAGTTGTT 
ACCGGCGCAG ACAATACCAA CGCCAACGCA GCAATCCACG GTTTGAATGT CGCCGGCCTT 
GCGCTGGATC GCATTGTAGT AAGTGGAATT GTTGCACAAA TGGGGATCAA CCTGCGCGGA 
GGCAGCAACT TTAACCTCAC CAATAGTACC ATTAACCAAT CCGGTACGGC GTCCATCGTT 
GAAGAAGGTA ATATCTATGC AACGAACCTC GGCGGAACCA ACTCGATTGT AAATTCTGCA 
TTAAAAAGAC CGGGCGGGCG GGCCGCGTAC TTCACCAATT ACGACGTGAA TATGACGAGG 
CTGACCATCG ATAACTCTTC ATTCGAAGAT GCAGAGTATG CAGCGTGCTT ACTCTTCGAA 
GGAAAAGGTT CGTCTACGAT GAGCCTTAAA GTTCAGAATG GCAGTCGTTT TACGAAACCG 
GGTTCGGCGG GCATTGAGGT TTATTCTAAT AACAGCGCCC AAATGGAGGC CGACATCCAG 
GGTGCCACCA TAGATATCGG CTCAGGAGCA GACGAGGGTA AAGGGATCGA CATGGCCGCA 
TCGGGAACAT CCAGATTGAA ATTCAATGTA GCCGGTAACA CCTCGGACTA CCGAAGTGGC 
CCGGGCTTCA ATTTCTTCGC TTTCAGCGAC GGATACCTTG AAGGCAATGT AACAAACAAT 
GTGCTGACGA ACAACGCTAC TGGTGAGGGA GGCTCTTTCC ACGGTATCGC ATTCTCGACA 
CAGGGATCAA CCGCTCGCGG AATTGTCCGG ATAAATGGCA ATACGATTAA CAATTCTTTG 
AGCTCCATTG GTATCAGCGC CCAGGCGGGT TCGACTGGCG GCGCACAGAG CAGCGCTGTG 
ATCGACAACA ACAATGTTTT CTTGACCGGC AGCAATTTCG CTCACGGGGT GTATGTCAAC 
TCCATCGGAG GTACCAACTA TAACGGAACA CTGTGCGCCA GCGTTACCAA CAATGATGTG 
ACGTTAAACG GCGGCGGCGC TGCCGCAGGT GGTTACAGGG CCGGCACGCC AGGCACAGTT 
CTCAACGTGC AGCAAGCCGC CTCATCCGGT TCAACGGCCT GGACTGCCGG CAACAACACT 
CCGAGTGGCT CCGGAACCCA AAACGGGCTT GGTACAATCA ACTATAACGC AGGAGGCCCC 
ACAGGCTGTC CGACTCCGTC GTTCAGCGGG TTGCGTGAAG CGGCTATCGA GGAGCCGGTC 
GCGGGAAGAA TTTCGGCTGA CTCATCTGTA ACGGAGCAAC AGCCGGTACA ACAAGTGGCA 
GCTCAGGCGC CTGCACCAAC GGAACCGAAA GAAGAAATCG CCCAGGCTGC CACCACGGCA 
CCAAGCCCGG CCAGGACGGA TGCTACGCAA TCGGGTGAAA CCGTGACGGT AAACGGCACC 
GGCAGCGGCT TTACATTGCC TGCCGGCAAA AACACTGTCA TCAAGTTCAG AGTGGTGATA 
GATGCGAACA TTCCGGCGTC AGACTGCGAA GTTTCGACCC AGGGAACAGT TAGCGGCAGC 
AACTTCACGT CTGTCCTGAC CGACGATCCT AATACTACCG GAACCGACAA TCCAACCGTC 
ACCCCGGTGG TGTCCGTACC GGTGATCACA TTCTGCCCCG GCGACCAGAC CCTATCGCCA 
GACCCGGGAA CCTGTACATC CACGCAGACC TTCGCGGCGA CTGCCGGTGC TTGTCCGGTA 
GCGACGATCA CCTACACCGT CAATGGCAAC CCGATCACCT TCCCGTATGC ATTCCCGGCC 
GGCAACACCA CCGTGCTGGT AACGGCTTCC AACGGCATCG GCACCGCGCC AACCTGCTCG 
TTTACCGTAA CGGTAACCCC TACCCCGGCA CCGCCGATTA CCGACGAGCC GGATGCTGCA 
ACTATTTGCG CAGGTTCGGG CGCTTCGTTC ACCGTGGCTA CTTCGCAGAC AGGCGTTACT 
TATCAATGGC AGAAAAAGCC ATTCGGGGGC GCATTCGCGG ACATTTCGAC CGGTACTAAC 
CCTACTGCCG ACGATGCAAC GCTGACGCTG ACCAATGTAC CGGCTTCGGA TAACCTTTCG 
GAATACCGCT GTATCATTAC AAACCCTTGT AACAACAGCA CCTCCGATGC GGCCGTGCTC 
ACGGTGAACG AGATCACCGG TTCGAGCGCT ACCGGAACGA CCAGCATTGC TCAGGGAGGG 
CCTATGCCGC ACGTGACGTT CACTGCTACC GGAGGGACAC TGCCGTACAC GTTCACCTAC 
AAGATCAACG ACGGGGCAAA TCAGACCGTG AGCACCACGG GGGCGCTCAC CAGCGCCAAG 
GTAGGCCAGC CGACCGAGAC TGTGGGGGCA TTTACGTACG AACTCGTGAG CGTAACGGAT 
GCCCAGAACT GCACGCTGAC GCCGCCTTCG CCCCAAACGG CCACCATCAC GATCACCAGC 
AACCTTTCCG CTACGATTTC AGGCAGCACT ACCGCTTGCC AGAGCGAGAC GGCTCCGCTG 
GTCACATTCA CGGCTGTGAA CGGCATCGCG CCATTTACAT TTACCTACCA AATCAACGGC 
GGGGCTGAAC AGCAAGTAAC CACTACCGGG GCTAGCACCA CGGCCACCGT GAGTGTGCCA 
ACCACTGCCA CCGGCACATT TGTGTACACG CTGACCAACG TGACCGGCGC AGGCAGCGCT 
TCCACGGCGA TTTCAGGACA AACGGCCTCC GTGACCATCG ACGCGAAGCC GACAATCGCA 
TTGACCGGCG ACGAGTACCA ATGCGACTTC GGTGCCGATC CGCAGACGTA CACGGTGTTT 
TTCACCGCCA CCGCCGGAGC CGTGATCACA ACTGACAAGG GAACCGTGAG CGGTAACACC 
GTGACAGGCA TCCCAAGCCA GGAAACGGCG ATCATCGTAG CCACAGTGAA CAACTGTTCG 
GACACGCTTA TCGCTTTCAA AGACTGCTCG ATGCCGGTGA CCCTGATCGA TTTCAGCGGT 
GCAAAGGTGG AAAACACGGT AGCACTGAAA TGGAATACCG CAGAGGAAAC CAACAGCGAC 
TATTTCGAGG TCCAGCGCAG CAGCAACGGC AAGAACTGGA CGGCCATCGG CACGCAGAAA 
TCGCAAGGCG AAAGCTACAA ACTCGTGGAT TACGCATTCG TGGACCAGAA ACCCGCTCAG 
GGCGACAACT TCTATCGCCT GAAAATGGTG GATGCTGACA AGACCTTCGC TTACAGCAAG 
ATCATCAACG TTCGCTATGA CGGACTGGCC CTCGTATCGG AACTTTATCC GAACCCGGTT 
TCCACCACCC TCAACCTGAG AAGCACCGAC TGGGGCCAGG TTAAATCGGT GGAACTGCAT 
AGCCTGACGG GAATGTCGGT TTATAAATCG GGTAAGACTG TTTCCAAAAC GATCGACGTG 
AAAAACCTGC CTGTGGGCAT GTACATTCTG ACGATCACGC ACAAAAACGG GGAAATTGTG 
AACCGAAAAG TGGTAATCAA CCGATAA 

 

Protein sequence

MRNLYFYLAG AALLASGVEM VGRLAETPAV PQEWIVQKAD RSVRNQQERV PFARTRKKSG 
TKALLAPSIT ATNTYVITSN TGPSGASAGD ELEYTVTINN GGPDPATGTV FTETIDANTT 
LVPGSVKASP IAQNDSYSTI GNVGINIPEG TGLFANDVSP AGTPISLNST TTVATTGGGS 
ATITAATGAF IYEPAAGYSG NDTFTYEIQN GSGMTSTATV TISVGSATNM IWFINSAAAA 
GGTGTLSKPF NSISAFNSIN GDGAASHPQN GHVIFIYSGS YTGPLTLRND QKILGQGSTQ 
SILSFTGFSA PNGTNQLPAV TGSNAGRPTL TTSSGTDNAI NLGTTNIIKG INIANTTGTK 
ISGSSAGTFT ASEVGLSGSG SALNLTNKTL NASFSEVSSS SATNGVSPIR ISSGNGTLTI 
PAGSITSTSV PAIDIAGKGT GDRIALNVTL TSVSANGGSK GLALQNATGS FQINGTGTTG 
GSGGTIQNIA DRGIDLRDVQ NITIKNMNLA SANTAEGPVV TGADNTNANA AIHGLNVAGL 
ALDRIVVSGI VAQMGINLRG GSNFNLTNST INQSGTASIV EEGNIYATNL GGTNSIVNSA 
LKRPGGRAAY FTNYDVNMTR LTIDNSSFED AEYAACLLFE GKGSSTMSLK VQNGSRFTKP 
GSAGIEVYSN NSAQMEADIQ GATIDIGSGA DEGKGIDMAA SGTSRLKFNV AGNTSDYRSG 
PGFNFFAFSD GYLEGNVTNN VLTNNATGEG GSFHGIAFST QGSTARGIVR INGNTINNSL 
SSIGISAQAG STGGAQSSAV IDNNNVFLTG SNFAHGVYVN SIGGTNYNGT LCASVTNNDV 
TLNGGGAAAG GYRAGTPGTV LNVQQAASSG STAWTAGNNT PSGSGTQNGL GTINYNAGGP 
TGCPTPSFSG LREAAIEEPV AGRISADSSV TEQQPVQQVA AQAPAPTEPK EEIAQAATTA 
PSPARTDATQ SGETVTVNGT GSGFTLPAGK NTVIKFRVVI DANIPASDCE VSTQGTVSGS 
NFTSVLTDDP NTTGTDNPTV TPVVSVPVIT FCPGDQTLSP DPGTCTSTQT FAATAGACPV 
ATITYTVNGN PITFPYAFPA GNTTVLVTAS NGIGTAPTCS FTVTVTPTPA PPITDEPDAA 
TICAGSGASF TVATSQTGVT YQWQKKPFGG AFADISTGTN PTADDATLTL TNVPASDNLS 
EYRCIITNPC NNSTSDAAVL TVNEITGSSA TGTTSIAQGG PMPHVTFTAT GGTLPYTFTY 
KINDGANQTV STTGALTSAK VGQPTETVGA FTYELVSVTD AQNCTLTPPS PQTATITITS 
NLSATISGST TACQSETAPL VTFTAVNGIA PFTFTYQING GAEQQVTTTG ASTTATVSVP 
TTATGTFVYT LTNVTGAGSA STAISGQTAS VTIDAKPTIA LTGDEYQCDF GADPQTYTVF 
FTATAGAVIT TDKGTVSGNT VTGIPSQETA IIVATVNNCS DTLIAFKDCS MPVTLIDFSG 
AKVENTVALK WNTAEETNSD YFEVQRSSNG KNWTAIGTQK SQGESYKLVD YAFVDQKPAQ 
GDNFYRLKMV DADKTFAYSK IINVRYDGLA LVSELYPNPV STTLNLRSTD WGQVKSVELH 
SLTGMSVYKS GKTVSKTIDV KNLPVGMYIL TITHKNGEIV NRKVVINR