Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1330 |
Symbol | |
ID | 8224901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1560729 |
End bp | 1561709 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644929191 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003085743 |
Protein GI | 255035122 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.521973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.989615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTTA TGAAACATAT CTCGGTATAT GTCCCCCAAT GCTCGTACAT CGAAGCGGTT TCGCCCGCTT ACCGGCTGTT CAACACGGCC AACGACTTTC TGAAAGCATC GGGAAAAGAA CCGCATTTCC ATGTCGAATT CGTAGGCCTT AACCACGATA TCCGGGCGCA GGACGGAGAA TACACGATCC GGATCAACAA GCTGCTGAGC GAAGTGACCC GCACCGACCT GGTCGTGATC CCTGCATTAT GCGGTAACCT GCGCGACTCC GTGGAGCTCG ACCGGCCCGC CATTCCGTGG ATGCTCGACA TGCGCGAAAA AGGTTCGGAG ATTGCGTCGC TCTGCCTCGG GGCGTTCCTG CTCGGTGCTA CCGGGCTGCT CGATGGCAAG AAATGCTCTA CCCACTGGGC TTATTATGAG GAGTTTAAAG AAATTTATCC GCAGATCGAA GTAGTGGATG GCACCATCAT CACGGATGAA GGTAAAGTAT ATTCCAGCGG CGGCGCCAAC TCGATCTGGA ACCTGCTGAT CTACATCCTC GAAAAATACA CCAGCCGCGA TATCGCCATC CTTGCCGCCA AGTATTTCGC AATTGACATC GACCGCGACA ACCAGCGCGC ATTCACGATC TTCAAAGGCC AGAAGAACCA CAACGACGAC GGTATCCTGG CGGCGCAGAA TTTTATCGAG AACAATTACA CCGAAAAGCT GACGATCACC GAGCTGGCCG ATATTGCCAG CGTAAGCCGC CGCAGCTTCG AGCGGCGTTT CAAGAACGCC ACCAATAACA CCATTAATGA ATACGTGCGT CGCGTGCGCG TCGAGGCGGC CAAACGCAGT TTTGAAGTGT CACGCAAAAA TGTAACCGAA GTCATGTACG ACGTGGGCTA CACCGATACG AAGGCATTTC GGGACGTGTT CAAAAAAGTG ACCGGCCTGA CGCCCGTCGA GTACCGTAAT AAATACAGCA AAGACAATTG A
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Protein sequence | MIVMKHISVY VPQCSYIEAV SPAYRLFNTA NDFLKASGKE PHFHVEFVGL NHDIRAQDGE YTIRINKLLS EVTRTDLVVI PALCGNLRDS VELDRPAIPW MLDMREKGSE IASLCLGAFL LGATGLLDGK KCSTHWAYYE EFKEIYPQIE VVDGTIITDE GKVYSSGGAN SIWNLLIYIL EKYTSRDIAI LAAKYFAIDI DRDNQRAFTI FKGQKNHNDD GILAAQNFIE NNYTEKLTIT ELADIASVSR RSFERRFKNA TNNTINEYVR RVRVEAAKRS FEVSRKNVTE VMYDVGYTDT KAFRDVFKKV TGLTPVEYRN KYSKDN
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