Gene Dfer_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1309 
Symbol 
ID8224880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1541183 
End bp1541899 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content52% 
IMG OID644929170 
Producthypothetical protein 
Protein accessionYP_003085722 
Protein GI255035101 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5266] ABC-type Co2+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.718075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAA AACAACTTCT CATTGCCGCA TTTCTGCTCT GCTGCTCTGC CCAACTCTTC 
GCGCATGCGC TCTGGATTCA AACAGCTTCG AAAGGCAAAG CCGGTCAGAA ACAGACCGTT
AAAATCATCT ACGCCGAGCC GGGAGATAAG CCGGAAAAAC TGGGCGAATG GTATTCCGAT
GTAAAGGAAT TCGAACTCTG GCTTACAGCT CCCGACCAGA AACGCACAAA ACTCGCGACG
GTAGCTGCCG ACGACCATTT CACGGCCGAT TTCACGCCCG ACCAGCAGGG CGTATACACG
CTATCGGTGG GCCACACGTC GAAAGACCTG GGTGGAACGA CCGTTTATCA GTTCAATGCC
AGCGCATTAG TGACCGTGGG TAAAGCCGAT GCGGGTAACA ATCCCGGTGC AAATGCCAAC
GAGCTGAGCG TATTCGCCGA TCCGGCCAAA ACCTACAAGG TAAACAGCCC GCTCAACCTC
CGCGGCCTTT TCAAAAACAA CGGCAATGAA AAACTATATG TGACGGTGGC GTCGCCATCG
GGATGGAGCA AACAAATCAC CACGGATGAA AAAGGGCTGG CGGAATTTGT ACCACTTTGG
CCGGGCACGT ATTACATCGA AGCGTCCAAA AGCTGGAAAG AAACCGGCAC ACATAACGGC
AATGAATACA AATCGTTTTG GCGCTGCGCG ACAACGCTCG TAGAAGTTGG AAAATAA
 
Protein sequence
MFKKQLLIAA FLLCCSAQLF AHALWIQTAS KGKAGQKQTV KIIYAEPGDK PEKLGEWYSD 
VKEFELWLTA PDQKRTKLAT VAADDHFTAD FTPDQQGVYT LSVGHTSKDL GGTTVYQFNA
SALVTVGKAD AGNNPGANAN ELSVFADPAK TYKVNSPLNL RGLFKNNGNE KLYVTVASPS
GWSKQITTDE KGLAEFVPLW PGTYYIEASK SWKETGTHNG NEYKSFWRCA TTLVEVGK