Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1283 |
Symbol | |
ID | 8224854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1514195 |
End bp | 1514911 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644929144 |
Product | conserved hypothetical signal peptide protein |
Protein accession | YP_003085696 |
Protein GI | 255035075 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0539757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.345622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACAA ACAAACTAAT GTGGACGCTG GCAGTAGCGC TCGTTTCTAC CGCTTCCTTT GCGCAGACTG TGGACGAAAT CGTAGATAAA CACGTCGCTG CCCTCGGTGG GCTCGACAAG ATCAAAGCTG TGAATACCGT GATCACCGAC CGCTCCCTGG CGGTGCAGGG CATGGAAATA CCCAATAAAA CGACGCTCGT CGTGGGTAAG TCCGTGCGCA ACGAATCGAC GGTGATGGGT AACACCATGG TGCAGGTGGT GGACAACGGC CAGGGCTGGA TGATCCGTCC GACGATGATG GGCGGCACCG GCGAGCCGGA AGATATGCCT GCCGACCAGC TCAAACAGCA ACTCAGCTCG CTGGACCCAT TCGGCGGCCT GGTGAACTAC AAGGAAAAAG GCAACAAAGT GGAGCTGGTA GGTAAAGAAA CGGTTAACAA AAAAGACGCA TTTCACCTGA AACTCACCAC GCAGGACGGC CAGGTGATCG ACGAGTACCT CGACGCGAAC ACCTACCTCG TAAGCAAAGT GAAGGTATCA ATGAACGGCC AGGACGGCGA AATCGAAATG TCGGATTACA AGGAAGTCGA TGGCGTGAAA TTCCCGAATA CCATGGAGAT CAGCAACGCG CAAATGGGCA CGATGTCGTT CATTACCAAC AAGATCACCG TCAACTCCCC GGTAGATCCG GCGATATTCA AAAAGCCGGC GAAATAG
|
Protein sequence | MKTNKLMWTL AVALVSTASF AQTVDEIVDK HVAALGGLDK IKAVNTVITD RSLAVQGMEI PNKTTLVVGK SVRNESTVMG NTMVQVVDNG QGWMIRPTMM GGTGEPEDMP ADQLKQQLSS LDPFGGLVNY KEKGNKVELV GKETVNKKDA FHLKLTTQDG QVIDEYLDAN TYLVSKVKVS MNGQDGEIEM SDYKEVDGVK FPNTMEISNA QMGTMSFITN KITVNSPVDP AIFKKPAK
|
| |