Gene Dfer_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1275 
Symbol 
ID8224846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1504034 
End bp1505035 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content52% 
IMG OID644929137 
Producthypothetical protein 
Protein accessionYP_003085689 
Protein GI255035068 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0364003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.373706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATCA ACCGTTTCCT ATCTCCCATT ATCGTCTACT ACTATTCATG GCGGATGGTC 
CTGTTTTCGC TCTTCACAGG TTCCACCGCC ATTTTTGTTT ATGAATATCT AGACTGGAAA
TGGGTGGCGA TCCCCTGGCT GCCTGTGTCG CTGGTGGGTA CGGCCACGGC ATTTTTTGTT
GGTTTCAAAA ACAACCAGTC CTACGACCGC AGCTGGGAAG CGCGCAAAGT TTGGGGTGCG
ATCACGAACC ACAGCCGGTC GTTCAGCGCA GCAGTGCGCT CATTTACCAC CTGCTCACCG
GATTCGGACA CCATTTCCGC CGCCATTGAA AACCGAACCA TCATTTACAG ACACATTGCC
TGGCTTTATG CATTGAAAAA CTCGATGGCG CAGCGCACCA ACTGGGAGCA TAAGGACCGC
GCGAGCGAGC GCCAGCGCAG AGCCCTCCGG CGCGCACAAG TGCCCTGCGA CATTGAAATA
GCCAAATACC TGCCGGAATC GGAGCTGGCG CTGATCAAGG ACAAAAAGAA CCAGGCGACG
CAAATCCTCG ACCTGCAATC GCAGCACATC CGCGACCTGC GCCGTGCGGG CTCGCTCGAT
GCCTATCAGC ATGTGGCATT GCAGGACCTC GTTTCGAAAC TGTACGATGA GCAGGGCAAA
AGCGAACGGA TCAAGAACAC GCCGTTCCCG CGCCAGTACG CAACGACTTC CACGCTTTTT
ATCTTCATTT TCATGACGCT CCTGCCATTC GGGCTGCTGC CGCAGTTCCT TGATCTGGGC
GAAAAATTCA TGTTTCTGCT CATTCCATTT AATATGATCG TGTCATGGGT GTTTATGTTT
ATGGAATACG TGGGCGATAT CAGCGAAAAT CCGTTTGAAG GCCTCCTGAA CGATACACCC
GTGAGTACCA TCATCCGCAA CATTGAAATA GACCTCAAAG AAATGCTCGG AGACGACGAT
CTGCCCGAGA AACTGACCGC CTATTCGGGC ACTTTGTTTT AA
 
Protein sequence
MYINRFLSPI IVYYYSWRMV LFSLFTGSTA IFVYEYLDWK WVAIPWLPVS LVGTATAFFV 
GFKNNQSYDR SWEARKVWGA ITNHSRSFSA AVRSFTTCSP DSDTISAAIE NRTIIYRHIA
WLYALKNSMA QRTNWEHKDR ASERQRRALR RAQVPCDIEI AKYLPESELA LIKDKKNQAT
QILDLQSQHI RDLRRAGSLD AYQHVALQDL VSKLYDEQGK SERIKNTPFP RQYATTSTLF
IFIFMTLLPF GLLPQFLDLG EKFMFLLIPF NMIVSWVFMF MEYVGDISEN PFEGLLNDTP
VSTIIRNIEI DLKEMLGDDD LPEKLTAYSG TLF