| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1252 |
|---|
| Symbol | |
|---|
| ID | 8224823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 1483145 |
|---|
| End bp | 1484089 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644929114 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003085666 |
|---|
| Protein GI | 255035045 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4301] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03438] probable methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.212741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGT TACAAACTTT TGCCCGCGAC ATCCACAAAG GACTGTCGGC GCCCCGGAAA
CACATTTCGA GCAAATACTT TTACGACGAC ATCGGTAGCG GCATTTTCCA GGACATTATG
AAAATGCCGG AATACTACCC TACCCCTTGC GAATTCGAGA TTTTATCGCT GCAAGGTGAT
AATATCATTC AAAAACTGGC ATTCGACAGG CCGTTCCAGA TCGTGGAATT TGGTGCCGGC
GACGGCATTA AAACGCGCCA GCTGCTGAAA AAGCTCATCG AGCGGCAAGT GGATTTCACT
TACGTCCCCA TCGACATTTC CGCGAAGGCG ATCGAGGAAC TGACGGGCAA TATGCTCGGC
CATTTGCCTG GGTTGAAAAT CCGGCCGATG ATCGGGAATT ACTTTTCGAT GATGGAAGAG
CTGGCCGCGT CGGGCGTTCC GAGCCTGCTG CTTTTTCTCG GCGGCAACAT CGGCAACTAC
GAAGCGCATG AGGTCACGAG CCTCCTCACC GATTTCCGCA AATGCATGAA TCCGGGCGAT
TACCTGCTCA CCGGGTTCGA CTTGCAGAAA AACCCCGCCA CCGTCCGCTG CGCATACGAC
GACCCGAAAG GCATTACCAA AGCATTCAAC ATCAACCTGT TGCACCGGAT CAACCGCGAG
CTGGGCGGAA CTTTCAAAAC CAATCAGTTC GATTTTTACT CACATTATAA CCCTGTAAAT
GGCGAAGTAA GGAGCTACCT GGTGAGCCTT GTGCCGCAAA AAGTACACAT CCGGCACACG
GACAAATGCT ACGATTTTGA ACGGAATGAA TTGATATGGA CCGAGTTATC CCAAAAATAC
ACGCTCACGG GCATTGAGAA AATTGCGGAG GCCAACGGCT TCCGCGTCGT GGAGCATTTC
CAGGATTGCA AGGCTTATTT TACCGATAGC TTGTGGACAT TATAA
|
|---|
| Protein sequence | MTELQTFARD IHKGLSAPRK HISSKYFYDD IGSGIFQDIM KMPEYYPTPC EFEILSLQGD
NIIQKLAFDR PFQIVEFGAG DGIKTRQLLK KLIERQVDFT YVPIDISAKA IEELTGNMLG
HLPGLKIRPM IGNYFSMMEE LAASGVPSLL LFLGGNIGNY EAHEVTSLLT DFRKCMNPGD
YLLTGFDLQK NPATVRCAYD DPKGITKAFN INLLHRINRE LGGTFKTNQF DFYSHYNPVN
GEVRSYLVSL VPQKVHIRHT DKCYDFERNE LIWTELSQKY TLTGIEKIAE ANGFRVVEHF
QDCKAYFTDS LWTL
|
|---|
| |