| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1236 |
|---|
| Symbol | |
|---|
| ID | 8224807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 1468046 |
|---|
| End bp | 1469344 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644929098 |
|---|
| Product | Acetyl xylan esterase |
|---|
| Protein accession | YP_003085650 |
|---|
| Protein GI | 255035029 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3458] Acetyl esterase (deacetylase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.299345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0188849 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC GCTTTTTACT AATCCAAATC TTCCTCTGGA TTACCATTAT TTCCCTCCAT
GCCCAACCGG CACGGCGGCC CGTGGACGTG ATCGTCACGA CCGACCGCGA CGACTGGACG
TACAAACCCG GAGATAAAGT CCAGTTTCAA ATCACGGTGT TGCGCAATGG CAACCCGGTG
AAAAATGCGC AGGTACGATA TGAAATTGGC CTGGAAAAGC TCGAACCCAC CATTAAAGAG
ACTAAAACCG CCGCAAACGG CACATTAACC GTCGACGGCG GAACGTTGAA AACACCTGGT
TTCCTCCGCT GCATTGCATG GGCCACAGTA GACGGCGCGG AGTTCCGCGG GCTGTCAACA
GCCGGTTTCG ATCCGCTGAA AATCCAGCCC ACCGTTGCGA ATCCGACAGA TTTTGATACG
TTTTGGGACA ATGCTAAAAA GGAACTTGCC ACGGTGCCGA TGGACGCTAA GATGACGCTC
CTACCCGAAC GCTGCACCGA AAAAACGAAC GTTTACCACC TTAGCCTGCA AAATACCCGT
CCGGGCGTGC GTGTTTACGG CATTCTGAGC ATTCCGAAAA AAGAAGGAAA ATATCCCGCA
TTGCTGCGCG TGCCGGGCGC GGGCGTACGC GCCTACAATG GCGACGTGGC CACGGCCGAT
AAGGACATTA TCACCCTGGA AATAGGCATT CACGGCATTC CGGTGATCAT GGACCCGTCG
GTTTACCTCG ATATGGGCCA GGGCGTCTTG AACGGCTATC CTACTTATAA TCTGGATGAT
AAGGATAAAT TTTACTACAA ACGCGTGTAC CTCGGCTGTG TGCGCGCGAA CGATTTCTTA
ACCAGCCTGC CGCAATACGA CGGCACCAAC CTGGCCGTGA CGGGAGGAAG CCAGGGCGGC
GCATTATCGA TCATCACGGC CGGCCTCGAC CCTCGCGTCA AGTGGCTTGG GGCATTCTAC
CCTGCATTAA GTGATGTAAC GGGCTACCTG CACGGCCGCG CGGGCGGATG GCCGCATTAT
TTCGATAAGA ATGGCGCCAA AACGAACAAT ATGAAGGAAA AGCTGAACAC GGTGTCCTAC
TACGACGTGG TGAATTTTGC GCGGCGCGTG AAAGCTCCCG GCCTTTATAT GTGGGGTTTC
AACGACGAAA CCTGCCCGCC GACATCCATG TACGCCGCTT ACAATGTGAC CACCGCGCCC
AAAGAATTGA AACTCTATCT CGACACCGGG CACTGGACTT ATCCGGAGGA ACGCGATGCG
ATGAACAGCT GGCTCGTCGA TAAACTCAAA GGCAAATAA
|
|---|
| Protein sequence | MKNRFLLIQI FLWITIISLH AQPARRPVDV IVTTDRDDWT YKPGDKVQFQ ITVLRNGNPV
KNAQVRYEIG LEKLEPTIKE TKTAANGTLT VDGGTLKTPG FLRCIAWATV DGAEFRGLST
AGFDPLKIQP TVANPTDFDT FWDNAKKELA TVPMDAKMTL LPERCTEKTN VYHLSLQNTR
PGVRVYGILS IPKKEGKYPA LLRVPGAGVR AYNGDVATAD KDIITLEIGI HGIPVIMDPS
VYLDMGQGVL NGYPTYNLDD KDKFYYKRVY LGCVRANDFL TSLPQYDGTN LAVTGGSQGG
ALSIITAGLD PRVKWLGAFY PALSDVTGYL HGRAGGWPHY FDKNGAKTNN MKEKLNTVSY
YDVVNFARRV KAPGLYMWGF NDETCPPTSM YAAYNVTTAP KELKLYLDTG HWTYPEERDA
MNSWLVDKLK GK
|
|---|
| |