Gene Dfer_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1233 
Symbol 
ID8224804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1464278 
End bp1465483 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content51% 
IMG OID644929095 
Producthypothetical protein 
Protein accessionYP_003085647 
Protein GI255035026 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.460296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00958711 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAAG TTGCCTCTTC CTCGCTACGC CTGGATTCGA TCGATGTGTT CCGGGCGGTT 
ACCATGCTTT TAATGATCTT CGTGAATGAC TTTTGGACGC TCGAAGCAGT GCCCAAATGG
CTGGAACACA GTAAGGCGGA AGAGGATGCC ATGGGCCTGT CGGATGTCGT TTTTCCAGCG
TTCCTGTTTA TCGTAGGCCT TTCCATTCCA TTCGCCATAT CCAATCGCAG GAAGAAGGGT
GACGGTAATG CATTAATCAT CAGGCATATA GCCGAACGGA CTTTTGCTCT GTTGCTGATG
GGTATATTCA TCGTAAACTT CGAGAACATA GCCGAGCCCG CGATGGTGAT CAGTAAATAT
GTGTGGGAGA TCGGCATGGT GGCAGCATTT TTCCTGATCT GGAATGTCTA TCCTAATGAT
CCTGCAAGGA CTTCGCTTTA CACCGGCTTG AAGATAGCTG GCTATCTATT GCTGGCAGGC
CTGGCTTTCA TTTACAAAGG CGGCGATGCT GCTAATCCCT CGTGGATGGG CACGCATTGG
TATGGTATCC TTGGCCTGAT CGGCTGGTCG TACCTGCTGG GCGCGCTCAC GTATGTACTT
ACGGGTGATC GCCTCGGATG GGCGGTTGTT GCATGGGTGT TTTTTGTGGT TTTCAATCTC
GCGGAGTTTG CAGGGGCGCT TGACTGGCTT CAATCAGTCA AAGATTATGT ATGGATCGTG
GGTAGCGGCT CGATGCCCGC GTTTGTCATG GGCGGAGTGG TGGCTTCGGT GGTTTATCGG
AAAAGTGCAA ATCGGGATGC GGCGCGCGGT GCTTTTCTGC TGACGTTGGT CGTGCTGGGA
ATGGTCTTGT TCGCGTATGG TGCTGCTACC CGCCCTTTCT GGGGTATTTC CAAAATTCGT
GCTACACCGG CCTGGATCGG CATTTGTTTG GGAATCAGTT TCTGGGCATT TGCATTTTTT
TACTGGCTGG TCGATATGCG TAGGATCAGC AGGTGGGCGG ATATCATCAA ACCCGCGGGT
ACCGCAACAT TGACCTGTTA TTTGATTCCT TATATCTGGT ATGCAGTCAA TTCGCTGGCC
AGCATCAGCC TGCCCGCCGT GGTACGCACC GGCGGCTTGG GGCTCGTCAA ATCTGCTTGC
TTTTCATTGC TGGTCATCAT GCTCACAGGC GCCATCAACC GCGTCGGCAT TAAACTTAAA
ATATAA
 
Protein sequence
MNKVASSSLR LDSIDVFRAV TMLLMIFVND FWTLEAVPKW LEHSKAEEDA MGLSDVVFPA 
FLFIVGLSIP FAISNRRKKG DGNALIIRHI AERTFALLLM GIFIVNFENI AEPAMVISKY
VWEIGMVAAF FLIWNVYPND PARTSLYTGL KIAGYLLLAG LAFIYKGGDA ANPSWMGTHW
YGILGLIGWS YLLGALTYVL TGDRLGWAVV AWVFFVVFNL AEFAGALDWL QSVKDYVWIV
GSGSMPAFVM GGVVASVVYR KSANRDAARG AFLLTLVVLG MVLFAYGAAT RPFWGISKIR
ATPAWIGICL GISFWAFAFF YWLVDMRRIS RWADIIKPAG TATLTCYLIP YIWYAVNSLA
SISLPAVVRT GGLGLVKSAC FSLLVIMLTG AINRVGIKLK I